LOCUS AEC08627.1 144 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana Ribosomal protein L7Ae/L30e/S12e/
Gadd45 family protein protein.
ACCESSION CP002685-4439
PROTEIN_ID AEC08627.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 19698289)
AUTHORS Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D.,
Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V.,
Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L.,
Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam,L.,
Tallon,L.J., Gill,J.E., Adams,M.D., Carrera,A.J., Creasy,T.H.,
Goodman,H.M., Somerville,C.R., Copenhaver,G.P., Preuss,D.,
Nierman,W.C., White,O., Eisen,J.A., Salzberg,S.L., Fraser,C.M. and
Venter,J.C.
TITLE Sequence and analysis of chromosome 2 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 761-768 (1999)
PUBMED 10617197
REFERENCE 2 (bases 1 to 19698289)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 19698289)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="2"
/ecotype="Columbia"
protein /locus_tag="AT2G32060"
/gene_synonym="F22D22.19"
/gene_synonym="F22D22_19"
/inference="Similar to RNA sequence,
EST:INSD:ES144946.1,INSD:EL996181.1,INSD:EL022550.1,
INSD:EL062601.1,INSD:BP570044.1,INSD:BP587249.1,
INSD:EL319166.1,INSD:ES041433.1,INSD:EH993378.1,
INSD:EL980249.1,INSD:ES038807.1,INSD:BP668745.1,
INSD:EH831684.1,INSD:ES150572.1,INSD:BP622363.1,
INSD:R64772.1,INSD:BP609489.1,INSD:EH826573.1,
INSD:CB263784.1,INSD:EG487076.1,INSD:EL975812.1,
INSD:EG514432.1,INSD:EL020933.1,INSD:EL041419.1,
INSD:ES036825.1,INSD:DR193808.1,INSD:BP578822.1,
INSD:ES122071.1,INSD:EL113185.1,INSD:EL127125.1,
INSD:ES078091.1,INSD:ES114845.1,INSD:ES089692.1,
INSD:ES138601.1,INSD:N37834.1,INSD:EH877940.1,
INSD:ES113647.1,INSD:ES028748.1,INSD:EL979045.1,
INSD:EL323959.1,INSD:DR377954.1,INSD:EL304613.1,
INSD:BP563162.1,INSD:BP643969.1,INSD:EL994463.1,
INSD:EL060272.1,INSD:ES135393.1,INSD:ES208559.1,
INSD:EL140215.1,INSD:EL256214.1,INSD:EH980013.1,
INSD:EL986822.1,INSD:EL028620.1,INSD:DR372177.1,
INSD:ES081118.1,INSD:ES017728.1,INSD:EL228817.1,
INSD:ES047345.1,INSD:BP568509.1,INSD:ES088313.1,
INSD:ES160823.1,INSD:ES012659.1,INSD:BP646690.1,
INSD:EH990636.1,INSD:BP563297.1,INSD:BP591728.1,
INSD:BP579346.1,INSD:EH884012.1,INSD:ES092073.1,
INSD:BP615353.1,INSD:ES164257.1,INSD:ES206018.1,
INSD:BP563646.1,INSD:ES059548.1,INSD:EL078597.1,
INSD:ES118051.1,INSD:BP642851.1,INSD:AV532762.1,
INSD:BP592468.1,INSD:EL976840.1,INSD:BP570655.1,
INSD:EL013920.1,INSD:BP635761.1,INSD:EH858184.1,
INSD:EL011266.1,INSD:EL969715.1,INSD:ES141093.1,
INSD:ES013633.1,INSD:CB264926.1,INSD:EL083707.1,
INSD:ES048442.1,INSD:BP596722.1,INSD:EL332715.1,
INSD:DR372114.1,INSD:EL991509.1,INSD:EL986809.1,
INSD:EL132307.1,INSD:ES041596.1,INSD:ES046093.1,
INSD:AV784206.1,INSD:DR193807.1,INSD:EL195870.1,
INSD:ES007088.1,INSD:ES164408.1,INSD:BP628742.1,
INSD:BP656758.1,INSD:ES202942.1,INSD:BP672203.1,
INSD:EL333725.1,INSD:EH821065.1,INSD:EL117423.1,
INSD:EH872879.1,INSD:EG496961.1,INSD:ES171098.1,
INSD:EL211814.1,INSD:EL985926.1,INSD:EL107840.1,
INSD:BP576859.1,INSD:ES211127.1,INSD:BP661045.1,
INSD:ES198187.1,INSD:BP624081.1,INSD:EH839857.1,
INSD:ES056159.1,INSD:BP580202.1,INSD:BP628497.1,
INSD:CB263366.1,INSD:EL999821.1,INSD:BP578699.1,
INSD:EH970731.1,INSD:AA395884.1,INSD:ES086890.1,
INSD:EH952595.1,INSD:EL220649.1,INSD:BP587783.1,
INSD:AI999579.1,INSD:EH981822.1,INSD:EL060436.1,
INSD:EH846924.1,INSD:BP573435.1,INSD:BP625469.1,
INSD:EH861489.1,INSD:Z18502.1,INSD:ES169029.1,
INSD:ES150081.1,INSD:DR193812.1,INSD:EG496960.1,
INSD:CK120403.1,INSD:BP668422.1,INSD:DR193809.1,
INSD:ES030598.1,INSD:ES172187.1,INSD:EL142362.1,
INSD:BP668196.1,INSD:BP666271.1,INSD:EL986504.1,
INSD:AV814427.1,INSD:BP564812.1,INSD:ES182660.1,
INSD:BP624908.1,INSD:ES139018.1,INSD:EL127835.1,
INSD:DR313018.1,INSD:ES064052.1,INSD:EL184804.1,
INSD:EH970051.1,INSD:AA713134.1,INSD:BP571159.1,
INSD:BP644848.1,INSD:EL336231.1,INSD:BP594809.1,
INSD:ES049651.1,INSD:EH924979.1,INSD:ES049414.1,
INSD:ES201406.1,INSD:BP661958.1,INSD:ES165212.1,
INSD:DR193806.1,INSD:BP597550.1,INSD:BP578322.1,
INSD:EL300872.1,INSD:ES001690.1,INSD:ES133158.1,
INSD:EL203696.1,INSD:EH947222.1,INSD:ES188388.1,
INSD:EH965525.1,INSD:EL105536.1,INSD:ES087724.1,
INSD:T22169.1,INSD:ES123311.1,INSD:BP597124.1,
INSD:ES010480.1,INSD:BP586577.1,INSD:BP594491.1,
INSD:ES126926.1,INSD:BP567774.1,INSD:EL340707.1,
INSD:BP575090.1,INSD:ES039917.1,INSD:ES172747.1,
INSD:EL977148.1,INSD:ES153640.1,INSD:ES126748.1,
INSD:BP659019.1,INSD:BP664607.1,INSD:BP582693.1,
INSD:BP593479.1,INSD:CB265031.1"
/inference="similar to RNA sequence, mRNA:INSD:AY085161.1"
/note="Ribosomal protein L7Ae/L30e/S12e/Gadd45 family
protein; FUNCTIONS IN: structural constituent of ribosome;
INVOLVED IN: translation; LOCATED IN: cytosolic small
ribosomal subunit, cytosolic ribosome, nucleus; EXPRESSED
IN: 22 plant structures; EXPRESSED DURING: 13 growth
stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein S12e
(InterPro:IPR000530), Ribosomal protein
L7Ae/L30e/S12e/Gadd45 (InterPro:IPR004038); BEST
Arabidopsis thaliana protein match is: Ribosomal protein
L7Ae/L30e/S12e/Gadd45 family protein (TAIR:AT1G15930.1);
Has 949 Blast hits to 949 proteins in 327 species: Archae
- 187; Bacteria - 0; Metazoa - 311; Fungi - 169; Plants -
131; Viruses - 0; Other Eukaryotes - 151 (source: NCBI
BLink)."
/db_xref="Araport:AT2G32060"
/db_xref="TAIR:AT2G32060"
intron_pos 3:2 (1/3)
intron_pos 104:0 (2/3)
intron_pos 126:0 (3/3)
BEGIN
1 MSGDEAVAAP VVPPVAEAAV IPEDMDVSTA LELTVRKSRA YGGVVRGLHE SAKLIEKRNA
61 QLCVLAEDCN QPDYVKLVKA LCADHSIKLL TVPSAKTLGE WAGLCKIDSE GNARKVVGCS
121 CLVIKDFGEE TTALNIVKKH LDSN
//