LOCUS AEC08569.1 1062 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana homologue of trithorax protein.
ACCESSION CP002685-4358
PROTEIN_ID AEC08569.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 19698289)
AUTHORS Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D.,
Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V.,
Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L.,
Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam,L.,
Tallon,L.J., Gill,J.E., Adams,M.D., Carrera,A.J., Creasy,T.H.,
Goodman,H.M., Somerville,C.R., Copenhaver,G.P., Preuss,D.,
Nierman,W.C., White,O., Eisen,J.A., Salzberg,S.L., Fraser,C.M. and
Venter,J.C.
TITLE Sequence and analysis of chromosome 2 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 761-768 (1999)
PUBMED 10617197
REFERENCE 2 (bases 1 to 19698289)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 19698289)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="2"
/ecotype="Columbia"
protein /gene="ATX1"
/locus_tag="AT2G31650"
/gene_synonym="homologue of trithorax"
/gene_synonym="SDG27"
/gene_synonym="SET DOMAIN PROTEIN 27"
/gene_synonym="T9H9.17"
/gene_synonym="T9H9_17"
/inference="Similar to RNA sequence,
EST:INSD:ES012311.1,INSD:EL222913.1,INSD:CD532231.1,
INSD:CD534979.1,INSD:AU227371.1,INSD:ES122307.1"
/inference="similar to RNA sequence, mRNA:INSD:AF329273.1"
/note="homologue of trithorax (ATX1); CONTAINS InterPro
DOMAIN/s: SET domain (InterPro:IPR001214), Zinc finger,
PHD-type, conserved site (InterPro:IPR019786), Zinc
finger, PHD-type (InterPro:IPR001965), FY-rich, C-terminal
(InterPro:IPR003889), Post-SET domain
(InterPro:IPR003616), FY-rich, N-terminal
(InterPro:IPR003888), Protein kinase C-like, phorbol
ester/diacylglycerol binding (InterPro:IPR002219), Lamin-B
receptor of TUDOR domain (InterPro:IPR019023), FY-rich,
C-terminal subgroup (InterPro:IPR018516), Zinc finger,
FYVE/PHD-type (InterPro:IPR011011), PWWP
(InterPro:IPR000313), FY-rich, N-terminal subgroup
(InterPro:IPR018518), Zinc finger, PHD-finger
(InterPro:IPR019787); BEST Arabidopsis thaliana protein
match is: trithorax-like protein 2 (TAIR:AT1G05830.2); Has
7192 Blast hits to 6948 proteins in 474 species: Archae -
2; Bacteria - 393; Metazoa - 3480; Fungi - 840; Plants -
1251; Viruses - 0; Other Eukaryotes - 1226 (source: NCBI
BLink)."
/db_xref="Araport:AT2G31650"
/db_xref="TAIR:AT2G31650"
intron_pos 195:2 (1/23)
intron_pos 213:0 (2/23)
intron_pos 238:0 (3/23)
intron_pos 311:1 (4/23)
intron_pos 353:2 (5/23)
intron_pos 388:2 (6/23)
intron_pos 455:1 (7/23)
intron_pos 486:1 (8/23)
intron_pos 519:0 (9/23)
intron_pos 572:0 (10/23)
intron_pos 620:0 (11/23)
intron_pos 636:0 (12/23)
intron_pos 675:1 (13/23)
intron_pos 697:1 (14/23)
intron_pos 718:0 (15/23)
intron_pos 737:0 (16/23)
intron_pos 760:0 (17/23)
intron_pos 821:1 (18/23)
intron_pos 903:1 (19/23)
intron_pos 924:0 (20/23)
intron_pos 950:0 (21/23)
intron_pos 982:0 (22/23)
intron_pos 1016:2 (23/23)
BEGIN
1 MACFSNETQI EIDVHDLVEA PIRYDSIESI YSIPSSALCC VNAVGSHSLM SKKVKAQKLP
61 MIEQFEIEGS GVSASDDCCR SDDYKLRIQR PEIVRVYYRR RKRPLRECLL DQAVAVKTES
121 VELDEIDCFE EKKRRKIGNC ELVKSGMESI GLRRCKENNA FSGNKQNGSS RRKGSSSKNQ
181 DKATLASRSA KKWVRLSYDG VDPTSFIGLQ CKVFWPLDAL WYEGSIVGYS AERKRYTVKY
241 RDGCDEDIVF DREMIKFLVS REEMELLHLK FCTSNVTVDG RDYDEMVVLA ATLDECQDFE
301 PGDIVWAKLA GHAMWPAVIV DESIIGERKG LNNKVSGGGS LLVQFFGTHD FARIKVKQAI
361 SFIKGLLSPS HLKCKQPRFE EGMQEAKMYL KAHRLPERMS QLQKGADSVD SDMANSTEEG
421 NSGGDLLNDG EVWLRPTEHV DFRHIIGDLL IINLGKVVTD SQFFKDENHI WPEGYTAMRK
481 FTSLTDHSAS ALYKMEVLRD AETKTHPLFI VTADSGEQFK GPTPSACWNK IYNRIKKVQN
541 SDSPNILGEE LNGSGTDMFG LSNPEVIKLV QDLSKSRPSS HVSMCKNSLG RHQNQPTGYR
601 PVRVDWKDLD KCNVCHMDEE YENNLFLQCD KCRMMVHAKC YGELEPCDGA LWLCNLCRPG
661 APDMPPRCCL CPVVGGAMKP TTDGRWAHLA CAIWIPETCL SDVKKMEPID GVNKVSKDRW
721 KLMCTICGVS YGACIQCSNN SCRVAYHPLC ARAAGLCVEL ENDMSVEGEE ADQCIRMLSF
781 CKRHRQTSTA CLGSEDRIKS ATHKTSEYLP PPNPSGCART EPYNCFGRRG RKEPEALAAA
841 SSKRLFVENQ PYVIGGYSRL EFSTYKSIHG SKVSQMNTPS NILSMAEKYR YMRETYRKRL
901 AFGKSGIHGF GIFAKLPHRA GDMMIEYTGE LVRPSIADKR EQLIYNSMVG AGTYMFRIDD
961 ERVIDATRTG SIAHLINHSC VPNCYSRVIT VNGDEHIIIF AKRHIPKWEE LTYDYRFFSI
1021 GERLSCSCGF PGCRGVVNDT EAEEQHAKIC VPRCDLIDWT AE
//