LOCUS AEC08540.1 238 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana salt tolerance homologue protein.
ACCESSION CP002685-4314
PROTEIN_ID AEC08540.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 19698289)
AUTHORS Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D.,
Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V.,
Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L.,
Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam,L.,
Tallon,L.J., Gill,J.E., Adams,M.D., Carrera,A.J., Creasy,T.H.,
Goodman,H.M., Somerville,C.R., Copenhaver,G.P., Preuss,D.,
Nierman,W.C., White,O., Eisen,J.A., Salzberg,S.L., Fraser,C.M. and
Venter,J.C.
TITLE Sequence and analysis of chromosome 2 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 761-768 (1999)
PUBMED 10617197
REFERENCE 2 (bases 1 to 19698289)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 19698289)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="2"
/ecotype="Columbia"
protein /gene="STH"
/locus_tag="AT2G31380"
/gene_synonym="B-box domain protein 25"
/gene_synonym="BBX25"
/gene_synonym="salt tolerance homologue"
/gene_synonym="STO HOMOLOG"
/gene_synonym="T28P16.13"
/gene_synonym="T28P16_13"
/inference="Similar to RNA sequence,
EST:INSD:BP570925.1,INSD:EL270664.1,INSD:BP582875.1,
INSD:BP628320.1,INSD:EL059806.1,INSD:EH976252.1,
INSD:CB259371.1,INSD:DR750451.1,INSD:BP656199.1,
INSD:AV784474.1,INSD:BP595759.1,INSD:AV544522.1,
INSD:AV543552.1,INSD:EL039803.1,INSD:BP577215.1,
INSD:AV563523.1,INSD:EH958714.1,INSD:EL117677.1,
INSD:DR750131.1,INSD:DR750370.1,INSD:AV820946.1,
INSD:AV799139.1,INSD:EL184037.1,INSD:DR750914.1,
INSD:AV823496.1,INSD:AI100239.1,INSD:BP568941.1,
INSD:EH944288.1,INSD:AV537602.1,INSD:BP565199.1,
INSD:BP584168.1,INSD:DR751366.1,INSD:BP572404.1,
INSD:BP565054.1,INSD:DN604721.1,INSD:DR750743.1,
INSD:EL161666.1,INSD:AV820290.1,INSD:AI099816.1,
INSD:DR359597.1,INSD:DR751296.1,INSD:AV534164.1,
INSD:DR751043.1,INSD:DR364941.1,INSD:DR751713.1,
INSD:BP651913.1,INSD:BP578420.1,INSD:EL227453.1,
INSD:DR751712.1,INSD:EL243589.1,INSD:EL318430.1,
INSD:DR751052.1,INSD:EH956382.1,INSD:ES029177.1,
INSD:DR750587.1,INSD:DR750742.1,INSD:BP571619.1,
INSD:DR750915.1,INSD:AV808071.1,INSD:AV521805.1,
INSD:BP646846.1,INSD:BP597376.1,INSD:AV819596.1,
INSD:BP666671.1,INSD:ES037531.1,INSD:DR750588.1,
INSD:BP571554.1,INSD:DR751297.1,INSD:BP577162.1,
INSD:EH878770.1,INSD:EL156838.1,INSD:EH802527.1,
INSD:BP656287.1,INSD:AV538535.1,INSD:BP571320.1,
INSD:BP575493.1,INSD:EH986477.1,INSD:AV561696.1,
INSD:EL142512.1,INSD:DR750130.1,INSD:BP633324.1,
INSD:BP629530.1,INSD:AV558737.1,INSD:BP639665.1,
INSD:EL245197.1,INSD:BP563887.1,INSD:DR382934.1,
INSD:BP648353.1,INSD:EL212934.1,INSD:EL120198.1,
INSD:EH854157.1,INSD:DR364938.1,INSD:BP576862.1,
INSD:AV788562.1,INSD:BP662734.1,INSD:BP575117.1,
INSD:F14207.1,INSD:BP563243.1,INSD:BP631891.1,
INSD:AI100240.1,INSD:EH991926.1,INSD:DR383732.1,
INSD:BP627837.1,INSD:AV822444.1,INSD:EH947056.1,
INSD:CB259257.1,INSD:DR750882.1,INSD:EL248241.1,
INSD:BP564560.1,INSD:ES193764.1,INSD:BP570301.1,
INSD:DR750600.1,INSD:BP566717.1,INSD:EL270893.1,
INSD:BP583435.1,INSD:AV543499.1,INSD:BP786878.1,
INSD:ES017960.1,INSD:AV548068.1,INSD:BP655512.1,
INSD:AV782309.1,INSD:EL023398.1,INSD:EH937453.1,
INSD:EL076815.1,INSD:BP777430.1,INSD:BP566084.1,
INSD:BP580982.1,INSD:BP659985.1,INSD:AV783213.1,
INSD:BP791429.1,INSD:BP653440.1,INSD:DR751042.1,
INSD:DR184376.1,INSD:AV806673.1,INSD:BP569559.1,
INSD:BP566484.1,INSD:BP781063.1,INSD:BP578178.1,
INSD:BP621004.1,INSD:BP570291.1,INSD:BP599591.1,
INSD:ES104078.1,INSD:EL255175.1,INSD:BP583436.1,
INSD:EL297709.1,INSD:BP567235.1,INSD:BP582060.1,
INSD:BP658477.1,INSD:EL142361.1,INSD:AV538114.1,
INSD:DR364939.1,INSD:AV560721.1,INSD:DR750450.1,
INSD:EL247386.1,INSD:BP786190.1,INSD:DR750698.1,
INSD:BP579881.1,INSD:BP566750.1,INSD:BP568550.1,
INSD:DR751304.1,INSD:EL325576.1,INSD:AV794370.1,
INSD:EL295568.1,INSD:ES023023.1,INSD:BP566507.1,
INSD:BP589401.1,INSD:DR750142.1,INSD:BP791640.1,
INSD:BP582411.1,INSD:EL239493.1,INSD:AV807730.1,
INSD:EL000287.1"
/inference="similar to RNA sequence,
mRNA:INSD:AY063097.1,INSD:AF323666.1,INSD:AF370311.1,
INSD:BT000798.1,INSD:AF325077.1"
/note="salt tolerance homologue (STH); FUNCTIONS IN:
sequence-specific DNA binding transcription factor
activity, zinc ion binding, protein domain specific
binding; INVOLVED IN: regulation of transcription; LOCATED
IN: endomembrane system, intracellular; EXPRESSED IN: 21
plant structures; EXPRESSED DURING: 12 growth stages;
CONTAINS InterPro DOMAIN/s: Zinc finger, B-box
(InterPro:IPR000315); BEST Arabidopsis thaliana protein
match is: B-box zinc finger family protein
(TAIR:AT1G06040.1); Has 1801 Blast hits to 1351 proteins
in 117 species: Archae - 0; Bacteria - 0; Metazoa - 6;
Fungi - 4; Plants - 1702; Viruses - 0; Other Eukaryotes -
89 (source: NCBI BLink)."
/db_xref="Araport:AT2G31380"
/db_xref="TAIR:AT2G31380"
intron_pos 62:0 (1/2)
intron_pos 160:0 (2/2)
BEGIN
1 MKIQCDVCEK APATLICCAD EAALCAKCDV EVHAANKLAS KHQRLFLDSL STKFPPCDIC
61 LEKAAFIFCV EDRALLCRDC DEATHAPNTR SANHQRFLAT GIRVALSSTS CNQEVEKNHF
121 DPSNQQSLSK PPTQQPAAPS PLWATDEFFS YSDLDCSNKE KEQLDLGELD WLAEMGLFGD
181 QPDQEALPVA EVPELSFSHL AHAHSYNRPM KSNVPNKKQR LEYRYDDEEE HFLVPDLG
//