LOCUS AEC08524.1 378 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana actin-related protein C1B protein.
ACCESSION CP002685-4295
PROTEIN_ID AEC08524.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 19698289)
AUTHORS Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D.,
Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V.,
Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L.,
Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam,L.,
Tallon,L.J., Gill,J.E., Adams,M.D., Carrera,A.J., Creasy,T.H.,
Goodman,H.M., Somerville,C.R., Copenhaver,G.P., Preuss,D.,
Nierman,W.C., White,O., Eisen,J.A., Salzberg,S.L., Fraser,C.M. and
Venter,J.C.
TITLE Sequence and analysis of chromosome 2 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 761-768 (1999)
PUBMED 10617197
REFERENCE 2 (bases 1 to 19698289)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 19698289)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="2"
/ecotype="Columbia"
protein /gene="ARPC1B"
/locus_tag="AT2G31300"
/gene_synonym="ACTIN-RELATED PROTEIN C1"
/gene_synonym="actin-related protein C1B"
/gene_synonym="ARPC1"
/gene_synonym="F16D14.14"
/gene_synonym="F16D14_14"
/inference="Similar to RNA sequence,
EST:INSD:BX835798.1,INSD:BP800102.1,INSD:BX839805.1,
INSD:ES179720.1,INSD:DR356987.1,INSD:BU635485.1,
INSD:DR356986.1,INSD:AI993666.1,INSD:BP843149.1,
INSD:AV831176.1"
/inference="similar to RNA sequence,
mRNA:INSD:AF439845.1,INSD:BT000567.1"
/note="actin-related protein C1B (ARPC1B); FUNCTIONS IN:
actin binding, nucleotide binding; INVOLVED IN: actin
filament organization; LOCATED IN: Arp2/3 protein complex,
nucleus, cytoplasm; CONTAINS InterPro DOMAIN/s: WD40
repeat 2 (InterPro:IPR019782), WD40 repeat-like-containing
domain (InterPro:IPR011046), Actin-related protein 2/3
complex, subunit 1 (InterPro:IPR017383),
WD40-repeat-containing domain (InterPro:IPR017986),
WD40/YVTN repeat-like-containing domain
(InterPro:IPR015943), WD40 repeat (InterPro:IPR001680),
WD40 repeat, subgroup (InterPro:IPR019781); BEST
Arabidopsis thaliana protein match is: actin-related
protein C1A (TAIR:AT2G30910.3); Has 4117 Blast hits to
2979 proteins in 306 species: Archae - 4; Bacteria - 869;
Metazoa - 1495; Fungi - 819; Plants - 455; Viruses - 0;
Other Eukaryotes - 475 (source: NCBI BLink)."
/db_xref="Araport:AT2G31300"
/db_xref="TAIR:AT2G31300"
intron_pos 24:1 (1/14)
intron_pos 54:0 (2/14)
intron_pos 79:2 (3/14)
intron_pos 111:1 (4/14)
intron_pos 134:2 (5/14)
intron_pos 158:0 (6/14)
intron_pos 182:2 (7/14)
intron_pos 197:0 (8/14)
intron_pos 224:1 (9/14)
intron_pos 254:0 (10/14)
intron_pos 282:2 (11/14)
intron_pos 304:0 (12/14)
intron_pos 337:2 (13/14)
intron_pos 357:1 (14/14)
BEGIN
1 MAVVDVHRFA ESITCHAWSP DLSMVALCPN NTEVHIYKSL SQDHWERLHV LQKHDQIVSG
61 IDWSSKSNKI VTVSHDRNSY VWSLEGAEWV PTLVILRLNR AALCVQWSPK ENKFAVGSGA
121 KTVCICYYEQ ENNWWVSKLI RKRHESSVTS VAWHPNNVLL ATTSTDGKCR VFSTFIKGVD
181 TKDSKAGSPA ETKFGEQILQ LDLSYSWAFG VKWSPSGNTL AYVGHSSMIY FVDDVGPSPL
241 AQSVAFRDLP LRDVLFISEK MVIGVGYDSN PMVFAADDTG IWSFIRYIGE KKAASSGSSY
301 SSQFSEAFGK FYGSQSKSTT ANDASDSRGG VHDNSITSIV PLGKGGSPKV MRFSTSGLDG
361 KIAIWDLENM QQELGNQF
//