LOCUS AEC08519.1 723 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana transcription factor bHLH155-like
protein protein.
ACCESSION CP002685-4289
PROTEIN_ID AEC08519.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 19698289)
AUTHORS Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D.,
Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V.,
Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L.,
Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam,L.,
Tallon,L.J., Gill,J.E., Adams,M.D., Carrera,A.J., Creasy,T.H.,
Goodman,H.M., Somerville,C.R., Copenhaver,G.P., Preuss,D.,
Nierman,W.C., White,O., Eisen,J.A., Salzberg,S.L., Fraser,C.M. and
Venter,J.C.
TITLE Sequence and analysis of chromosome 2 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 761-768 (1999)
PUBMED 10617197
REFERENCE 2 (bases 1 to 19698289)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 19698289)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="2"
/ecotype="Columbia"
protein /gene="CPUORF7"
/locus_tag="AT2G31280"
/gene_synonym="conserved peptide upstream open reading
frame 7"
/gene_synonym="F16D14.12"
/gene_synonym="F16D14_12"
/gene_synonym="LHL2"
/gene_synonym="LL2"
/gene_synonym="LONESOME HIGHWAY LIKE 2"
/inference="Similar to RNA sequence,
EST:INSD:BE528282.1,INSD:EG445328.1,INSD:EG443658.1,
INSD:BP837397.1,INSD:BP816989.1,INSD:EG435626.1,
INSD:EL231518.1,INSD:EG435654.1,INSD:EG435659.1,
INSD:EG435668.1,INSD:EG443677.1,INSD:EG443660.1,
INSD:EG445236.1,INSD:EG445233.1,INSD:EH945559.1,
INSD:EG443662.1,INSD:EG445232.1,INSD:EG435674.1,
INSD:EG445234.1,INSD:EG443687.1,INSD:EG435661.1"
/inference="similar to RNA sequence, mRNA:INSD:AJ576042.1"
/note="conserved peptide upstream open reading frame 7
(CPUORF7); FUNCTIONS IN: sequence-specific DNA binding
transcription factor activity; INVOLVED IN: regulation of
transcription; LOCATED IN: nucleus; CONTAINS InterPro
DOMAIN/s: Helix-loop-helix DNA-binding domain
(InterPro:IPR001092), Helix-loop-helix DNA-binding
(InterPro:IPR011598); BEST Arabidopsis thaliana protein
match is: basic helix-loop-helix (bHLH) DNA-binding
superfamily protein (TAIR:AT1G06150.1); Has 35333 Blast
hits to 34131 proteins in 2444 species: Archae - 798;
Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants -
531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI
BLink)."
/db_xref="Araport:AT2G31280"
/db_xref="TAIR:AT2G31280"
intron_pos 33:1 (1/8)
intron_pos 59:2 (2/8)
intron_pos 99:2 (3/8)
intron_pos 127:0 (4/8)
intron_pos 147:0 (5/8)
intron_pos 549:0 (6/8)
intron_pos 583:0 (7/8)
intron_pos 623:0 (8/8)
BEGIN
1 MGKRQISQDE VGPPIKPRAG LRREQAGRGS YREILKSFCF NTDWDYAVFW QLNHRGSRMV
61 LTLEDAYYDH HGTNMHGAHD PLGLAVAKMS YHVYSLGEGI VGQVAVSGEH QWVFPENYNN
121 CNSAFETILV VAVGPCGVVQ LGSLCKPKMP SEGLHAEAFP DCSGEVDKAM DVEESNILTQ
181 YKTRRSDSMP YNTPSSCLVM EKAAQVVGGR EVVQGSTCGS YSGVTFGFPV DLVGAKHENQ
241 VGTNIIRDAP HVGMTSGCKD SRDLDPNLHL YMKNHVLNDT STSALAIEAE RLITSQSYPR
301 LDSTFQATSR TDKESSYHNE VFQLSENQGN KYIKETERML GRNCESSQFD ALISSGYTFA
361 GSELLEALGS AFKQTNTGQE ELLKSEHGST MRPTDDMSHS QLTFDPGPEN LLDAVVANVC
421 QRDGNARDDM MSSRSVQSLL TNMELAEPSG QKKHNIVNPI NSAMNQPPMA EVDTQQNSSD
481 ICGAFSSIGF SSTYPSSSSD QFQTSLDIPK KNKKRAKPGE SSRPRPRDRQ LIQDRIKELR
541 ELVPNGSKCS IDSLLERTIK HMLFLQNVTK HAEKLSKSAN EKMQQKETGM QGSSCAVEVG
601 GHLQVSSIIV ENLNKQGMVL IEFNLCLNSS PKFCECVLKV FLGIGQMLCE ECGHFLEIAN
661 VIRSLDLVIL RGFTETQGEK TWICFVTEVG SRITQFMKEI PKQIKVFSLV LIELWISMIY
721 MTD
//