LOCUS AEC08518.1 720 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana transcription factor bHLH155-like
protein protein.
ACCESSION CP002685-4291
PROTEIN_ID AEC08518.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 19698289)
AUTHORS Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D.,
Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V.,
Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L.,
Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam,L.,
Tallon,L.J., Gill,J.E., Adams,M.D., Carrera,A.J., Creasy,T.H.,
Goodman,H.M., Somerville,C.R., Copenhaver,G.P., Preuss,D.,
Nierman,W.C., White,O., Eisen,J.A., Salzberg,S.L., Fraser,C.M. and
Venter,J.C.
TITLE Sequence and analysis of chromosome 2 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 761-768 (1999)
PUBMED 10617197
REFERENCE 2 (bases 1 to 19698289)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 19698289)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="2"
/ecotype="Columbia"
protein /gene="CPUORF7"
/locus_tag="AT2G31280"
/gene_synonym="conserved peptide upstream open reading
frame 7"
/gene_synonym="F16D14.12"
/gene_synonym="F16D14_12"
/gene_synonym="LHL2"
/gene_synonym="LL2"
/gene_synonym="LONESOME HIGHWAY LIKE 2"
/inference="Similar to RNA sequence,
EST:INSD:EG435653.1,INSD:EG443681.1,INSD:EG443658.1,
INSD:BP837397.1,INSD:BP816989.1,INSD:EG443682.1,
INSD:EG435626.1,INSD:EL231518.1,INSD:EG435669.1,
INSD:EG449004.1,INSD:EG443661.1,INSD:EG443693.1,
INSD:EG435654.1,INSD:EG443685.1,INSD:EG435659.1,
INSD:EG435625.1,INSD:EG435668.1,INSD:EG443677.1,
INSD:EG445235.1,INSD:EG443663.1,INSD:EH945559.1,
INSD:EG443662.1,INSD:EG445232.1,INSD:EG435674.1,
INSD:EG445234.1,INSD:EG443687.1,INSD:BE528282.1,
INSD:EG445237.1,INSD:EG445328.1,INSD:AI998931.1,
INSD:EG443680.1,INSD:EG435660.1,INSD:EG443683.1,
INSD:BE524478.1,INSD:EG448996.1,INSD:EG443660.1,
INSD:EG443692.1,INSD:EG445236.1,INSD:EG445233.1,
INSD:EG443656.1,INSD:EG443684.1,INSD:EG443691.1,
INSD:EG435658.1,INSD:EG435661.1"
/inference="similar to RNA sequence,
mRNA:INSD:AK221935.1,INSD:AY231425.1,INSD:AY954808.1,
INSD:AY129831.1"
/note="conserved peptide upstream open reading frame 7
(CPUORF7); FUNCTIONS IN: sequence-specific DNA binding
transcription factor activity; INVOLVED IN: regulation of
transcription; LOCATED IN: nucleus; CONTAINS InterPro
DOMAIN/s: Helix-loop-helix DNA-binding domain
(InterPro:IPR001092), Helix-loop-helix DNA-binding
(InterPro:IPR011598); BEST Arabidopsis thaliana protein
match is: basic helix-loop-helix (bHLH) DNA-binding
superfamily protein (TAIR:AT1G06150.2); Has 440 Blast hits
to 368 proteins in 24 species: Archae - 0; Bacteria - 0;
Metazoa - 4; Fungi - 0; Plants - 436; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink)."
/db_xref="Araport:AT2G31280"
/db_xref="TAIR:AT2G31280"
intron_pos 33:2 (1/10)
intron_pos 73:2 (2/10)
intron_pos 101:0 (3/10)
intron_pos 115:0 (4/10)
intron_pos 135:0 (5/10)
intron_pos 175:0 (6/10)
intron_pos 577:0 (7/10)
intron_pos 611:0 (8/10)
intron_pos 651:0 (9/10)
intron_pos 693:0 (10/10)
BEGIN
1 MGSTSQEILK SFCFNTDWDY AVFWQLNHRG SRMVLTLEDA YYDHHGTNMH GAHDPLGLAV
61 AKMSYHVYSL GEGIVGQVAV SGEHQWVFPE NYNNCNSAFE FHNVWESQIS AGIKTILVVA
121 VGPCGVVQLG SLCKVNEDVN FVNHIRHLFL ALRDPLADHA ANLRQCNMNN SLCLPKMPSE
181 GLHAEAFPDC SGEVDKAMDV EESNILTQYK TRRSDSMPYN TPSSCLVMEK AAQVVGGREV
241 VQGSTCGSYS GVTFGFPVDL VGAKHENQVG TNIIRDAPHV GMTSGCKDSR DLDPNLHLYM
301 KNHVLNDTST SALAIEAERL ITSQSYPRLD STFQATSRTD KESSYHNEVF QLSENQGNKY
361 IKETERMLGR NCESSQFDAL ISSGYTFAGS ELLEALGSAF KQTNTGQEEL LKSEHGSTMR
421 PTDDMSHSQL TFDPGPENLL DAVVANVCQR DGNARDDMMS SRSVQSLLTN MELAEPSGQK
481 KHNIVNPINS AMNQPPMAEV DTQQNSSDIC GAFSSIGFSS TYPSSSSDQF QTSLDIPKKN
541 KKRAKPGESS RPRPRDRQLI QDRIKELREL VPNGSKCSID SLLERTIKHM LFLQNVTKHA
601 EKLSKSANEK MQQKETGMQG SSCAVEVGGH LQVSSIIVEN LNKQGMVLIE MLCEECGHFL
661 EIANVIRSLD LVILRGFTET QGEKTWICFV TESQNSKVMQ RMDILWSLVQ IFQPKANEKG
//