LOCUS AEC08511.2 447 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana basic helix-loop-helix (bHLH) DNA-
binding superfamily protein protein.
ACCESSION CP002685-4282
PROTEIN_ID AEC08511.2
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 19698289)
AUTHORS Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D.,
Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V.,
Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L.,
Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam,L.,
Tallon,L.J., Gill,J.E., Adams,M.D., Carrera,A.J., Creasy,T.H.,
Goodman,H.M., Somerville,C.R., Copenhaver,G.P., Preuss,D.,
Nierman,W.C., White,O., Eisen,J.A., Salzberg,S.L., Fraser,C.M. and
Venter,J.C.
TITLE Sequence and analysis of chromosome 2 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 761-768 (1999)
PUBMED 10617197
REFERENCE 2 (bases 1 to 19698289)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 19698289)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="2"
/ecotype="Columbia"
protein /locus_tag="AT2G31220"
/gene_synonym="F16D14.6"
/gene_synonym="F16D14_6"
/inference="Similar to RNA sequence,
EST:INSD:DR749649.1,INSD:DR749648.1,INSD:DR369120.1,
INSD:AU236974.1,INSD:AU227985.1"
/inference="similar to RNA sequence,
mRNA:INSD:BT005711.1,INSD:AF251695.1,INSD:AK228592.1"
/note="basic helix-loop-helix (bHLH) DNA-binding
superfamily protein; FUNCTIONS IN: DNA binding,
sequence-specific DNA binding transcription factor
activity; INVOLVED IN: regulation of transcription;
LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s:
Helix-loop-helix DNA-binding domain (InterPro:IPR001092),
Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST
Arabidopsis thaliana protein match is: basic
helix-loop-helix (bHLH) DNA-binding superfamily protein
(TAIR:AT1G06170.2); Has 1822 Blast hits to 1822 proteins
in 125 species: Archae - 0; Bacteria - 0; Metazoa - 15;
Fungi - 26; Plants - 1767; Viruses - 0; Other Eukaryotes -
14 (source: NCBI BLink)."
/db_xref="Araport:AT2G31220"
/db_xref="TAIR:AT2G31220"
intron_pos 265:0 (1/2)
intron_pos 415:0 (2/2)
BEGIN
1 MGCFDPNTPA EVTVESSFSQ AEPPPPPPQV LVAGSTSNSN CSVEVEELSE FHLSPQDCPQ
61 ASSTPLQFHI NPPPPPPPPC DQLHNNLIHQ MASHQQQHSN WDNGYQDFVN LGPNSATTPD
121 LLSLLHLPRC SLPPNHHPSS MLPTSFSDIM SSSSAAAVMY DPLFHLNFPM QPRDQNQLRN
181 GSCLLGVEDQ IQMDANGGMN VLYFEGANNN NGGFENEILE FNNGVTRKGR GSRKSRTSPT
241 ERERRVHFND RFFDLKNLIP NPTKIDRASI VGEAIDYIKE LLRTIEEFKM LVEKKRCGRF
301 RSKKRARVGE GGGGEDQEEE EDTVNYKPQS EVDQSCFNKN NNNSLRCSWL KRKSKVTEVD
361 VRIIDDEVTI KLVQKKKINC LLFTTKVLDQ LQLDLHHVAG GQIGEHYSFL FNTKICEGSC
421 VYASGIADTL MEVVEKQYME AVPSNGY
//