LOCUS AEC08508.1 428 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana basic helix-loop-helix (bHLH) DNA-
binding superfamily protein protein.
ACCESSION CP002685-4279
PROTEIN_ID AEC08508.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 19698289)
AUTHORS Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D.,
Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V.,
Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L.,
Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam,L.,
Tallon,L.J., Gill,J.E., Adams,M.D., Carrera,A.J., Creasy,T.H.,
Goodman,H.M., Somerville,C.R., Copenhaver,G.P., Preuss,D.,
Nierman,W.C., White,O., Eisen,J.A., Salzberg,S.L., Fraser,C.M. and
Venter,J.C.
TITLE Sequence and analysis of chromosome 2 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 761-768 (1999)
PUBMED 10617197
REFERENCE 2 (bases 1 to 19698289)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 19698289)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="2"
/ecotype="Columbia"
protein /locus_tag="AT2G31210"
/gene_synonym="F16D14.5"
/gene_synonym="F16D14_5"
/inference="Similar to RNA sequence,
EST:INSD:DR749623.1,INSD:AU230597.1,INSD:BP833648.1,
INSD:BP834256.1,INSD:AU239304.1,INSD:BP817257.1,
INSD:DR749622.1,INSD:BP825680.1"
/inference="similar to RNA sequence,
mRNA:INSD:AJ519809.1,INSD:AK118441.1,INSD:BT009675.1"
/note="basic helix-loop-helix (bHLH) DNA-binding
superfamily protein; FUNCTIONS IN: DNA binding,
sequence-specific DNA binding transcription factor
activity; INVOLVED IN: regulation of transcription;
LOCATED IN: nucleus; EXPRESSED IN: leaf whorl, sepal,
flower; EXPRESSED DURING: petal differentiation and
expansion stage; CONTAINS InterPro DOMAIN/s:
Helix-loop-helix DNA-binding domain (InterPro:IPR001092),
Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST
Arabidopsis thaliana protein match is: basic
helix-loop-helix (bHLH) DNA-binding superfamily protein
(TAIR:AT1G06170.2); Has 1830 Blast hits to 1818 proteins
in 133 species: Archae - 2; Bacteria - 0; Metazoa - 18;
Fungi - 11; Plants - 1605; Viruses - 5; Other Eukaryotes -
189 (source: NCBI BLink)."
/db_xref="Araport:AT2G31210"
/db_xref="TAIR:AT2G31210"
intron_pos 243:0 (1/2)
intron_pos 396:0 (2/2)
BEGIN
1 MYEESSCFDP NSMVDNNGGF CAAETTFTVS HQFQPPLGST TNSFDDDLKL PTMDEFSVFP
61 SVISLPNSET QNQNISNNNH LINQMIQESN WGVSEDNSNF FMNTSHPNTT TTPIPDLLSL
121 LHLPRCSMSL PSSDIMAGSC FTYDPLFHLN LPPQPPLIPS NDYSGYLLGI DTNTTTQRDE
181 SNVGDENNNA QFDSGIIEFS KEIRRKGRGK RKNKPFTTER ERRCHLNERY EALKLLIPSP
241 SKGDRASILQ DGIDYINELR RRVSELKYLV ERKRCGGRHK NNEVDDNNNN KNLDDHGNED
301 DDDDDENMEK KPESDVIDQC SSNNSLRCSW LQRKSKVTEV DVRIVDDEVT IKVVQKKKIN
361 CLLLVSKVLD QLQLDLHHVA GGQIGEHYSF LFNTKIYEGS TIYASAIANR VIEVVDKHYM
421 ASLPNSNY
//