LOCUS AEC08495.1 216 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana trichome birefringence-like protein
(DUF828) protein.
ACCESSION CP002685-4258
PROTEIN_ID AEC08495.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 19698289)
AUTHORS Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D.,
Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V.,
Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L.,
Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam,L.,
Tallon,L.J., Gill,J.E., Adams,M.D., Carrera,A.J., Creasy,T.H.,
Goodman,H.M., Somerville,C.R., Copenhaver,G.P., Preuss,D.,
Nierman,W.C., White,O., Eisen,J.A., Salzberg,S.L., Fraser,C.M. and
Venter,J.C.
TITLE Sequence and analysis of chromosome 2 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 761-768 (1999)
PUBMED 10617197
REFERENCE 2 (bases 1 to 19698289)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 19698289)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="2"
/ecotype="Columbia"
protein /locus_tag="AT2G31110"
/gene_synonym="T16B12.8"
/gene_synonym="T16B12_8"
/gene_synonym="TBL40"
/gene_synonym="TRICHOME BIREFRINGENCE-LIKE 40"
/inference="Similar to RNA sequence,
EST:INSD:EL113338.1,INSD:BP592706.1,INSD:AV440523.1,
INSD:ES035220.1,INSD:ES072519.1,INSD:EH989491.1,
INSD:ES075767.1,INSD:DR375756.1,INSD:BP611667.1,
INSD:ES216240.1,INSD:ES067501.1,INSD:AU227525.1,
INSD:EH872927.1,INSD:ES186641.1,INSD:EH891966.1,
INSD:ES161411.1,INSD:ES210792.1,INSD:ES189315.1,
INSD:CB258539.1,INSD:AV533342.1,INSD:ES059393.1,
INSD:ES139188.1,INSD:ES020113.1,INSD:AV565003.1,
INSD:EL153513.1,INSD:EH871054.1,INSD:BP785290.1"
/note="TRICHOME BIREFRINGENCE-LIKE 40 (TBL40); CONTAINS
InterPro DOMAIN/s: Protein of unknown function DUF231,
plant (InterPro:IPR004253); BEST Arabidopsis thaliana
protein match is: TRICHOME BIREFRINGENCE-LIKE 39
(TAIR:AT2G42570.1); Has 35333 Blast hits to 34131 proteins
in 2444 species: Archae - 798; Bacteria - 22429; Metazoa -
974; Fungi - 991; Plants - 531; Viruses - 0; Other
Eukaryotes - 9610 (source: NCBI BLink)."
/db_xref="Araport:AT2G31110"
/db_xref="TAIR:AT2G31110"
intron_pos 9:0 (1/3)
intron_pos 67:2 (2/3)
intron_pos 120:2 (3/3)
BEGIN
1 MTVKPKEKDY GVTINLYRTQ FLVDVVQEKA GRVLVLDSIK QADAWLGMDV LIFNSWHWWT
61 HTSGLQPWDY MREGNQLYKD MNRLVAYYKG LNTWARWINN NIVPSRTQVF FQGVSPVHYD
121 GREWNEPLKS CNGQTQPFMG QRYPGGLPLG WVVVNKVLSR IRKPVHLLDL TTLSEYRKDA
181 HPSLYNGISK DLDCSHWCLP GLPDTWNLLL YSSLTS
//