LOCUS AEC08419.1 273 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana winged-helix DNA-binding transcription
factor family protein protein.
ACCESSION CP002685-4145
PROTEIN_ID AEC08419.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 19698289)
AUTHORS Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D.,
Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V.,
Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L.,
Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam,L.,
Tallon,L.J., Gill,J.E., Adams,M.D., Carrera,A.J., Creasy,T.H.,
Goodman,H.M., Somerville,C.R., Copenhaver,G.P., Preuss,D.,
Nierman,W.C., White,O., Eisen,J.A., Salzberg,S.L., Fraser,C.M. and
Venter,J.C.
TITLE Sequence and analysis of chromosome 2 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 761-768 (1999)
PUBMED 10617197
REFERENCE 2 (bases 1 to 19698289)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 19698289)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="2"
/ecotype="Columbia"
protein /locus_tag="AT2G30620"
/gene_synonym="T6B20.3"
/gene_synonym="T6B20_3"
/inference="Similar to RNA sequence,
EST:INSD:DR257096.1,INSD:EL304980.1,INSD:ES044911.1,
INSD:BP846092.1,INSD:EL170386.1,INSD:EL309169.1,
INSD:EH993010.1,INSD:ES126574.1,INSD:CB257953.1,
INSD:DR257045.1,INSD:DR257022.1,INSD:AV827449.1,
INSD:ES098807.1,INSD:AV555473.1,INSD:ES197973.1,
INSD:BP867518.1,INSD:ES075348.1,INSD:EL235721.1,
INSD:ES148531.1,INSD:DR230221.1,INSD:EH948375.1,
INSD:AV792142.1,INSD:BP664609.1,INSD:EL162916.1,
INSD:EL102572.1,INSD:ES025851.1,INSD:BP669892.1,
INSD:EL024775.1,INSD:BP647383.1,INSD:DR230227.1,
INSD:ES143899.1,INSD:ES082932.1,INSD:DR257057.1,
INSD:DR257011.1,INSD:DR257086.1,INSD:EH856401.1,
INSD:ES146174.1,INSD:EL153532.1,INSD:ES106425.1,
INSD:BP609476.1,INSD:EL176091.1,INSD:DR257061.1,
INSD:DR257079.1,INSD:BP798234.1,INSD:EL255423.1,
INSD:DR257049.1,INSD:DR257024.1,INSD:DR257012.1,
INSD:EL008350.1,INSD:EH961495.1,INSD:ES176946.1,
INSD:T88484.1,INSD:EG426323.1,INSD:DR257003.1,
INSD:ES045259.1,INSD:DR363862.1,INSD:DR257087.1,
INSD:EL276963.1,INSD:DR257064.1,INSD:DR257030.1,
INSD:DR257044.1,INSD:EL225427.1,INSD:DR257047.1,
INSD:DR257020.1,INSD:BE526143.1,INSD:BP671774.1,
INSD:BP659780.1,INSD:EH969844.1,INSD:EL036332.1,
INSD:BP859505.1,INSD:EL999306.1,INSD:BP606846.1,
INSD:DR257043.1,INSD:DR257073.1,INSD:BP785113.1,
INSD:DR256989.1,INSD:DR257014.1,INSD:DR256994.1,
INSD:DR257018.1,INSD:DR257008.1,INSD:DR257052.1,
INSD:EL130300.1,INSD:DR256996.1,INSD:EH891130.1,
INSD:EH929791.1,INSD:ES126640.1,INSD:EL042536.1,
INSD:ES210897.1,INSD:DR257032.1,INSD:DR257054.1,
INSD:DR257036.1,INSD:DR257072.1,INSD:AA394947.1,
INSD:EG426317.1,INSD:ES160526.1,INSD:EH825657.1,
INSD:EL974959.1,INSD:ES107153.1,INSD:ES021086.1,
INSD:EH855744.1,INSD:EL041477.1,INSD:ES082844.1,
INSD:DR257082.1,INSD:ES210188.1,INSD:DR257065.1,
INSD:AV567135.1,INSD:EL972808.1,INSD:BP633218.1,
INSD:BP653535.1,INSD:BP807370.1,INSD:DR257037.1,
INSD:EL127407.1,INSD:EL979109.1,INSD:DR257040.1,
INSD:DR377081.1,INSD:DR256985.1,INSD:BP668995.1,
INSD:BP638437.1,INSD:EL018363.1,INSD:DR230226.1,
INSD:ES062639.1,INSD:T22777.1,INSD:BP838048.1,
INSD:T46522.1,INSD:DR257048.1,INSD:ES195311.1,
INSD:EL222752.1,INSD:EH814772.1,INSD:DR257004.1,
INSD:T21311.1,INSD:AV820208.1,INSD:AV818934.1,
INSD:BP866539.1,INSD:DR257055.1,INSD:DR257001.1,
INSD:EH928255.1,INSD:EL215626.1,INSD:BP573505.1,
INSD:EL997036.1,INSD:EG426316.1,INSD:BP644867.1,
INSD:EL094715.1,INSD:ES190450.1,INSD:DR256990.1,
INSD:T76128.1,INSD:DR257058.1,INSD:BP599410.1,
INSD:BP796417.1,INSD:BP781814.1,INSD:BP657871.1,
INSD:EH942307.1,INSD:DR257071.1,INSD:DR256992.1,
INSD:DR257060.1,INSD:EL304151.1,INSD:BP598784.1,
INSD:EL143409.1,INSD:DR256997.1,INSD:BP777471.1,
INSD:EL114101.1,INSD:BP837023.1,INSD:BP579215.1,
INSD:EH866306.1,INSD:BP597233.1,INSD:BP625575.1,
INSD:EL127423.1,INSD:EH951568.1,INSD:EL009956.1,
INSD:DR256993.1,INSD:EH849873.1,INSD:DR257038.1,
INSD:DR257089.1,INSD:DR377382.1,INSD:DR257062.1,
INSD:EL327934.1,INSD:BP780796.1,INSD:EL333212.1,
INSD:EL193445.1,INSD:ES117304.1,INSD:BP862047.1,
INSD:EG426321.1,INSD:DR256986.1,INSD:BP644042.1,
INSD:BP582185.1,INSD:EG426320.1,INSD:DR257033.1,
INSD:DR257066.1,INSD:AV809489.1,INSD:AI998373.1,
INSD:DR257077.1,INSD:DR257068.1,INSD:AV788175.1,
INSD:DR257015.1,INSD:BP672170.1,INSD:EL052174.1,
INSD:BP572802.1,INSD:AV811007.1,INSD:T41684.1,
INSD:AV564308.1,INSD:ES071070.1,INSD:EL163331.1,
INSD:DR257081.1,INSD:EG486545.1,INSD:EL982071.1,
INSD:DR233825.1,INSD:EL083542.1,INSD:DR257084.1,
INSD:DR257051.1,INSD:EH829843.1,INSD:ES124808.1,
INSD:DR257094.1,INSD:BP853739.1,INSD:DR257028.1,
INSD:BP662555.1,INSD:DR256995.1,INSD:BP842571.1,
INSD:BP661880.1,INSD:DR374767.1,INSD:EH947607.1,
INSD:BP567041.1,INSD:EL031612.1,INSD:DR256988.1,
INSD:DR257021.1,INSD:BP825462.1,INSD:DR257063.1,
INSD:EH952056.1,INSD:EL133894.1,INSD:BP802560.1,
INSD:DR257085.1,INSD:DR257056.1,INSD:EG426322.1,
INSD:ES047832.1,INSD:ES205799.1,INSD:ES025688.1,
INSD:BP640885.1,INSD:ES098192.1,INSD:BP601323.1,
INSD:DR257053.1,INSD:DR257017.1,INSD:BP801533.2,
INSD:AV791986.1,INSD:T88258.1,INSD:DR257076.1,
INSD:EL248326.1,INSD:EH883981.1,INSD:EL071975.1,
INSD:EG486544.1,INSD:DR257093.1,INSD:ES016816.1,
INSD:DR257016.1,INSD:BP596356.1,INSD:DR257013.1,
INSD:EG426315.1,INSD:T44484.1,INSD:DR257042.1,
INSD:EH976179.1,INSD:DR256999.1,INSD:BP597266.1,
INSD:DR257092.1,INSD:EH933609.1,INSD:DR257059.1,
INSD:ES095327.1,INSD:ES065527.1,INSD:DR257090.1,
INSD:EG426318.1,INSD:DR257006.1,INSD:T46187.1,
INSD:EH934122.1,INSD:EL039159.1,INSD:ES060129.1,
INSD:ES160850.1,INSD:EL254356.1,INSD:DR257002.1,
INSD:ES044963.1,INSD:DR256998.1,INSD:DR257083.1,
INSD:DR257000.1,INSD:BP576273.1,INSD:BP625833.1,
INSD:DR257095.1,INSD:EL098474.1,INSD:DR256991.1,
INSD:ES113369.1,INSD:DR257027.1,INSD:BP814603.1,
INSD:BP799330.1,INSD:ES000643.1,INSD:DR257091.1,
INSD:DR257019.1,INSD:CF651668.1,INSD:EL264549.1,
INSD:ES058428.1,INSD:BP826655.1,INSD:DR257070.1,
INSD:EH965997.1,INSD:DR257026.1,INSD:EL165981.1,
INSD:BP820887.1,INSD:DR257034.1,INSD:EL163842.1,
INSD:ES009532.1,INSD:T43093.1,INSD:DR257025.1,
INSD:F13994.1,INSD:EL155223.1,INSD:DR257023.1,
INSD:ES121344.1,INSD:DR363863.1,INSD:DR257075.1,
INSD:EL187045.1,INSD:DR257029.1,INSD:EL325477.1,
INSD:EL144612.1,INSD:DR257009.1,INSD:DR370240.1,
INSD:DR257041.1,INSD:EH796734.1,INSD:EL174717.1,
INSD:BP626728.1,INSD:DR257007.1,INSD:BP791758.1,
INSD:ES167614.1,INSD:DR257078.1,INSD:DR230228.1,
INSD:DR257088.1,INSD:T20602.1,INSD:T88488.1,
INSD:BP652297.1,INSD:EL180568.1,INSD:AV798261.1,
INSD:CF652623.1,INSD:DR257046.1,INSD:ES114247.1,
INSD:BP822365.1,INSD:EL338050.1,INSD:DR256987.1,
INSD:ES087871.1,INSD:CB261033.1,INSD:DR257031.1,
INSD:DR257069.1,INSD:EL256825.1,INSD:EH851758.1,
INSD:AV800280.1,INSD:ES066781.1,INSD:ES114771.1,
INSD:DR257050.1,INSD:DR257074.1,INSD:DR257005.1,
INSD:BP649704.1,INSD:EL035983.1,INSD:BP637757.1,
INSD:DR257067.1,INSD:EH941073.1,INSD:DR377363.1,
INSD:BP579341.1,INSD:DR257080.1,INSD:EL992541.1,
INSD:BP852705.1,INSD:DR257035.1,INSD:DR257010.1,
INSD:ES011574.1"
/inference="similar to RNA sequence,
mRNA:INSD:BX819175.1,INSD:AY085789.1,INSD:AY040059.1,
INSD:BX820477.1,INSD:BX819446.1,INSD:AF360211.1,
INSD:X62459.1"
/note="winged-helix DNA-binding transcription factor
family protein; FUNCTIONS IN: DNA binding; INVOLVED IN:
nucleosome assembly; LOCATED IN: nucleolus, nucleus,
nucleosome; EXPRESSED IN: 23 plant structures; EXPRESSED
DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s:
Winged helix-turn-helix transcription repressor
DNA-binding (InterPro:IPR011991), Histone H5
(InterPro:IPR005819), Histone H1/H5 (InterPro:IPR005818);
BEST Arabidopsis thaliana protein match is: winged-helix
DNA-binding transcription factor family protein
(TAIR:AT1G06760.1); Has 19743 Blast hits to 11193 proteins
in 1486 species: Archae - 45; Bacteria - 7849; Metazoa -
5019; Fungi - 1189; Plants - 983; Viruses - 143; Other
Eukaryotes - 4515 (source: NCBI BLink)."
/db_xref="Araport:AT2G30620"
/db_xref="TAIR:AT2G30620"
intron_pos 68:0 (1/1)
BEGIN
1 MSIEEENVPT TVDSGAADTT VKSPEKKPAA KGGKSKKTTT AKATKKPVKA AAPTKKKTTS
61 SHPTYEEMIK DAIVTLKERT GSSQYAIQKF IEEKHKSLPP TFRKLLLVNL KRLVASEKLV
121 KVKASFKIPS ARSAATPKPA APVKKKATVV AKPKGKVAAA VAPAKAKAAA KGTKKPAAKV
181 VAKAKVTAKP KAKVTAAKPK SKSVAAVSKT KAVAAKPKAK ERPAKASRTS TRTSPGKKVA
241 APAKKVAVTK KAPAKSVKVK SPAKRASTRK AKK
//