LOCUS AEC08388.1 84 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana Homeodomain-like superfamily protein protein.
ACCESSION CP002685-4097
PROTEIN_ID AEC08388.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 19698289)
AUTHORS Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D.,
Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V.,
Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L.,
Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam,L.,
Tallon,L.J., Gill,J.E., Adams,M.D., Carrera,A.J., Creasy,T.H.,
Goodman,H.M., Somerville,C.R., Copenhaver,G.P., Preuss,D.,
Nierman,W.C., White,O., Eisen,J.A., Salzberg,S.L., Fraser,C.M. and
Venter,J.C.
TITLE Sequence and analysis of chromosome 2 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 761-768 (1999)
PUBMED 10617197
REFERENCE 2 (bases 1 to 19698289)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 19698289)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="2"
/ecotype="Columbia"
protein /gene="TCL1"
/locus_tag="AT2G30432"
/gene_synonym="TRICHOMELESS1"
/inference="Similar to RNA sequence,
EST:INSD:DR318896.1,INSD:DR318895.1,INSD:DR318894.1,
INSD:ES098596.1,INSD:BX840679.1,INSD:ES214650.1,
INSD:DR318893.1,INSD:DR373575.1,INSD:DR318897.1,
INSD:DR318892.1,INSD:DR318891.1"
/inference="similar to RNA sequence,
mRNA:INSD:BX821764.1,INSD:DQ108777.1"
/note="TRICHOMELESS1 (TCL1); FUNCTIONS IN: DNA binding;
INVOLVED IN: regulation of trichome morphogenesis;
CONTAINS InterPro DOMAIN/s: SANT, DNA-binding
(InterPro:IPR001005), Myb, DNA-binding
(InterPro:IPR014778), Homeodomain-related
(InterPro:IPR012287), MYB-like (InterPro:IPR017877), Myb
transcription factor (InterPro:IPR015495); BEST
Arabidopsis thaliana protein match is: Homeodomain-like
superfamily protein (TAIR:AT2G30424.1); Has 35333 Blast
hits to 34131 proteins in 2444 species: Archae - 798;
Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants -
531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI
BLink)."
/db_xref="Araport:AT2G30432"
/db_xref="TAIR:AT2G30432"
intron_pos 24:1 (1/2)
intron_pos 53:2 (2/2)
BEGIN
1 MDNTNRLRRL HCHKQPKFTH SSQEVSSMKW EFINMTEQEE DLIFRMYRLV GDRWDLIARR
61 VVGREAKEIE RYWIMRNCDY FSHK
//