LOCUS AEC08344.1 503 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana pentatricopeptide (PPR) repeat-containing
protein protein.
ACCESSION CP002685-4035
PROTEIN_ID AEC08344.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 19698289)
AUTHORS Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D.,
Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V.,
Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L.,
Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam,L.,
Tallon,L.J., Gill,J.E., Adams,M.D., Carrera,A.J., Creasy,T.H.,
Goodman,H.M., Somerville,C.R., Copenhaver,G.P., Preuss,D.,
Nierman,W.C., White,O., Eisen,J.A., Salzberg,S.L., Fraser,C.M. and
Venter,J.C.
TITLE Sequence and analysis of chromosome 2 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 761-768 (1999)
PUBMED 10617197
REFERENCE 2 (bases 1 to 19698289)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 19698289)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="2"
/ecotype="Columbia"
protein /locus_tag="AT2G30100"
/gene_synonym="T27E13.16"
/gene_synonym="T27E13_16"
/inference="Similar to RNA sequence,
EST:INSD:ES191345.1,INSD:EH857546.1,INSD:DR355722.1,
INSD:BP667704.1,INSD:EH902987.1,INSD:BP621912.1,
INSD:DR362926.1,INSD:DR362924.1,INSD:ES076512.1,
INSD:EH886713.1,INSD:DR362927.1,INSD:ES070158.1,
INSD:EL272075.1,INSD:ES183953.1,INSD:EL271086.1,
INSD:EH964285.1,INSD:EL061857.1,INSD:EH849621.1,
INSD:CD531946.1,INSD:EH840712.1,INSD:EL145683.1,
INSD:DR362925.1,INSD:AA394994.1,INSD:EL987223.1,
INSD:BP865576.1,INSD:BP562952.2,INSD:BP845628.1,
INSD:CD534701.1,INSD:EL295703.1,INSD:AV823703.1,
INSD:DR362923.1,INSD:EL078879.1,INSD:CB264999.1,
INSD:EL255291.1,INSD:ES205802.1,INSD:EL037662.1,
INSD:DR362928.1,INSD:DR382084.1,INSD:AV784723.1,
INSD:AI999014.1,INSD:CA781229.1,INSD:AA713002.1,
INSD:EL295268.1,INSD:EG516167.1,INSD:ES105774.1,
INSD:EL990805.1,INSD:EH899857.1,INSD:ES105428.1"
/inference="similar to RNA sequence,
mRNA:INSD:BX821459.1,INSD:BX819490.1"
/note="pentatricopeptide (PPR) repeat-containing protein;
LOCATED IN: chloroplast; EXPRESSED IN: 22 plant
structures; EXPRESSED DURING: 13 growth stages; CONTAINS
InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: pentatricopeptide (PPR) repeat-containing
protein (TAIR:AT5G04810.1); Has 68862 Blast hits to 30982
proteins in 1167 species: Archae - 27; Bacteria - 7834;
Metazoa - 26033; Fungi - 2446; Plants - 28670; Viruses -
2; Other Eukaryotes - 3850 (source: NCBI BLink)."
/db_xref="Araport:AT2G30100"
/db_xref="TAIR:AT2G30100"
intron_pos 245:0 (1/1)
BEGIN
1 MAYAHVFASL TISTISLRRF LPRLHRNHSV KPNSRIICNL KLNYSAGKFR EMGLSRSVEL
61 DQFITSEEEE GEAEEIGEGF FEAIEELERM TREPSDILEE MNHRLSSREL QLMLVYFAQE
121 GRDSWCTLEV FEWLKKENRV DEEIMELMVS IMCGWVKKLI EDECNAHQVF DLLIEMDCVG
181 LKPGFSMMDK VIALYCEMGK KESAVLFVKE VLRRRDGFGY SVVGGGGSEG RKGGPVGYLA
241 WKFMVDGDYR KAVDMVMELR LSGLKPEAYS YLIAMTAIVK ELNSLGKTLR ELKRFARAGF
301 VAEIDDHDRV LIEKYQSETL SRGLQLATWA VEEGQENDSI IGVVHERLLA MYICAGRGPE
361 AEKQLWKMKL AGREPEADLH DIVMAICASQ KEVNAVSRLL TRVEFMGSQR KKKTLSWLLR
421 GYVKGGHFEE AAETLVSMID SGLHPEYIDR VAVMQGMTRK IQRPRDVEAY MSLCKRLFDA
481 GLVGPCLVYM YIDKYKLWIV KMM
//