LOCUS AEC08323.1 459 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana F-box/RNI-like superfamily protein protein.
ACCESSION CP002685-4011
PROTEIN_ID AEC08323.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 19698289)
AUTHORS Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D.,
Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V.,
Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L.,
Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam,L.,
Tallon,L.J., Gill,J.E., Adams,M.D., Carrera,A.J., Creasy,T.H.,
Goodman,H.M., Somerville,C.R., Copenhaver,G.P., Preuss,D.,
Nierman,W.C., White,O., Eisen,J.A., Salzberg,S.L., Fraser,C.M. and
Venter,J.C.
TITLE Sequence and analysis of chromosome 2 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 761-768 (1999)
PUBMED 10617197
REFERENCE 2 (bases 1 to 19698289)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 19698289)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="2"
/ecotype="Columbia"
protein /locus_tag="AT2G29930"
/gene_synonym="F6K5.6"
/inference="Similar to RNA sequence,
EST:INSD:EG427273.1,INSD:EG427276.1,INSD:EG433613.1,
INSD:EG433682.1,INSD:EG433681.1,INSD:EG433612.1,
INSD:EG433679.1,INSD:EG426795.1,INSD:EG433672.1,
INSD:EG433675.1,INSD:EG433611.1,INSD:EG433614.1,
INSD:EG426793.1,INSD:EG433677.1,INSD:EG433616.1,
INSD:EG433615.1"
/inference="similar to RNA sequence,
mRNA:INSD:AY231413.1,INSD:AY773852.1"
/note="F-box/RNI-like superfamily protein; CONTAINS
InterPro DOMAIN/s: FBD-like (InterPro:IPR006566), F-box
domain, Skp2-like (InterPro:IPR022364), Leucine-rich
repeat 2 (InterPro:IPR013101); BEST Arabidopsis thaliana
protein match is: F-box/RNI-like/FBD-like
domains-containing protein (TAIR:AT1G21990.1); Has 35333
Blast hits to 34131 proteins in 2444 species: Archae -
798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants
- 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI
BLink)."
/db_xref="Araport:AT2G29930"
/db_xref="TAIR:AT2G29930"
intron_pos 302:0 (1/2)
intron_pos 349:0 (2/2)
BEGIN
1 MSTKRVDMGS RDYISSLPDE ILGKILSLFC TNRAACTSVL SKRWRNLLEL VDNLDLNDAY
61 GNHQYFCDFV DRTLALLSNS TTVKRFSLNC AFHNDASRVN SWIRTVFDRG FLDLHLETAH
121 MHRIDTEFFT SNTLLELTIC GGFYAEGRLP PGRVFFPALK SLSLVSVEFT DTLMYQNFIS
181 GCPVLEELFL HYDNETQCPA WKGLVSSPSI KRLNIYDNPS ELRYEAYKCC FQIPSLVYLD
241 YSSYVAKQYA VDLVSLEEAR LNIRYPERLV DQNEDIFGDV TDLLKGISNV KTLHLSSDSL
301 EVFHLCCDTM PVFHNLLTLS FESDEEIGWQ VVPLLLNKSP NLETLVIKSL VHQVTDMCGN
361 ACACISKRRK KKKKTTEDDE CCLSTCQVKV LNISGYRGTC KELKQMRHFL ENLKCLETVN
421 VGVDVKRREY KNGNNKYQRI TNAVMELPRF SSNCQIQFF
//