LOCUS AEC08310.1 293 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana RING/U-box superfamily protein protein.
ACCESSION CP002685-3991
PROTEIN_ID AEC08310.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 19698289)
AUTHORS Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D.,
Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V.,
Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L.,
Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam,L.,
Tallon,L.J., Gill,J.E., Adams,M.D., Carrera,A.J., Creasy,T.H.,
Goodman,H.M., Somerville,C.R., Copenhaver,G.P., Preuss,D.,
Nierman,W.C., White,O., Eisen,J.A., Salzberg,S.L., Fraser,C.M. and
Venter,J.C.
TITLE Sequence and analysis of chromosome 2 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 761-768 (1999)
PUBMED 10617197
REFERENCE 2 (bases 1 to 19698289)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 19698289)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="2"
/ecotype="Columbia"
protein /locus_tag="AT2G29840"
/gene_synonym="T27A16.6"
/gene_synonym="T27A16_6"
/inference="Similar to RNA sequence,
EST:INSD:EG430000.1,INSD:EG429994.1,INSD:EG429998.1,
INSD:EG430003.1,INSD:EG430001.1,INSD:EG435131.1,
INSD:EG430004.1,INSD:EG429999.1,INSD:EG429993.1,
INSD:EG435128.1,INSD:EG429995.1,INSD:EG435059.1,
INSD:EG435058.1"
/inference="similar to RNA sequence, mRNA:INSD:AY464612.1"
/note="RING/U-box superfamily protein; FUNCTIONS IN: zinc
ion binding; CONTAINS InterPro DOMAIN/s: Zinc finger,
RING-type (InterPro:IPR001841), Zinc finger, C3HC4
RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana
protein match is: RING/U-box superfamily protein
(TAIR:AT1G18780.1); Has 8183 Blast hits to 8167 proteins
in 259 species: Archae - 0; Bacteria - 0; Metazoa - 2399;
Fungi - 572; Plants - 3959; Viruses - 34; Other Eukaryotes
- 1219 (source: NCBI BLink)."
/db_xref="Araport:AT2G29840"
/db_xref="TAIR:AT2G29840"
intron_pos 53:1 (1/1)
BEGIN
1 MRGDSKQEGD EESKLTVSCA NDVEGIRVRK RGDSREEEAK GFKSLNWNWD FQTCALRVSM
61 TLTTVIPPEQ TEEAAPSDHA EEVDQVSLNE DLGLEVENDA NFFYGESSSS QPGRGVPFYE
121 LPHLRYEHDV NFSYGEASSS QLGGFVPFHG LPYLGYEQDP NVFYGQSSPY QPQEVLFHWL
181 PRYEHDFDHQ TEEAFHPQFE QVLQASFNET NTARLKPASK LAVESLNRKT YKKASDVVGE
241 NEMCSICLEE FDDGRSIVAL PCGHEFDDEC ALKWFETNHD CPLCRFKLPC EDQ
//