LOCUS AEC08290.1 536 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana Tetratricopeptide repeat (TPR)-like
superfamily protein protein.
ACCESSION CP002685-3967
PROTEIN_ID AEC08290.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 19698289)
AUTHORS Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D.,
Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V.,
Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L.,
Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam,L.,
Tallon,L.J., Gill,J.E., Adams,M.D., Carrera,A.J., Creasy,T.H.,
Goodman,H.M., Somerville,C.R., Copenhaver,G.P., Preuss,D.,
Nierman,W.C., White,O., Eisen,J.A., Salzberg,S.L., Fraser,C.M. and
Venter,J.C.
TITLE Sequence and analysis of chromosome 2 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 761-768 (1999)
PUBMED 10617197
REFERENCE 2 (bases 1 to 19698289)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 19698289)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="2"
/ecotype="Columbia"
protein /locus_tag="AT2G29670"
/gene_synonym="T27A16.23"
/gene_synonym="T27A16_23"
/inference="Similar to RNA sequence,
EST:INSD:EL054891.1,INSD:EL273725.1,INSD:EG485148.1,
INSD:EH991717.1,INSD:EL069928.1,INSD:EL085287.1,
INSD:EH881370.1,INSD:EL207089.1,INSD:EL017480.1,
INSD:EL146151.1,INSD:EL124542.1,INSD:AV805791.1,
INSD:EL107726.1,INSD:EL028443.1,INSD:EH834591.1,
INSD:AV806452.1,INSD:DR361037.1,INSD:EL292453.1,
INSD:EL289274.1,INSD:EH877232.1,INSD:EL189470.1,
INSD:AV806243.1,INSD:EH993690.1,INSD:BP846430.1,
INSD:EL266253.1,INSD:EH799156.1,INSD:AV799840.1,
INSD:DR343214.1,INSD:EH921743.1,INSD:EL137373.1,
INSD:CF773006.1,INSD:EH924357.1,INSD:EL128349.1,
INSD:EH939839.1,INSD:EH943710.1,INSD:T43284.1,
INSD:EH961708.1,INSD:EH799824.1,INSD:EL171437.1,
INSD:EL210660.1,INSD:EL228388.1,INSD:EH981791.1,
INSD:AV813239.1,INSD:EL066227.1,INSD:EH896945.1,
INSD:EH871487.1,INSD:EL213520.1,INSD:EL139862.1,
INSD:EL096190.1,INSD:EH801717.1,INSD:EL121123.1,
INSD:EH840115.1,INSD:AV817711.1,INSD:EL224129.1,
INSD:ES040818.1,INSD:EL328592.1,INSD:EL300036.1,
INSD:EL292288.1,INSD:EH900109.1,INSD:AV522568.1,
INSD:EL319283.1,INSD:EL226054.1,INSD:AV830818.1,
INSD:T41681.1,INSD:CA781805.1,INSD:EH981588.1,
INSD:EL270767.1,INSD:EH924793.1,INSD:DR375678.1,
INSD:EL290256.1,INSD:AU239910.1,INSD:EL240232.1,
INSD:EL042867.1,INSD:BP860620.1,INSD:EL328790.1,
INSD:AV822212.1,INSD:EL145629.1,INSD:EL001456.1,
INSD:AV782906.1,INSD:ES062388.1,INSD:EL270999.1,
INSD:EL143553.1,INSD:EL028172.1,INSD:EH800743.1,
INSD:EL316383.1"
/inference="similar to RNA sequence,
mRNA:INSD:AK119028.1,INSD:AY074336.1,INSD:BX820012.1,
INSD:AF375460.1,INSD:BT000642.1,INSD:AY096656.1"
/note="Tetratricopeptide repeat (TPR)-like superfamily
protein; FUNCTIONS IN: binding; LOCATED IN: chloroplast;
EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15
growth stages; CONTAINS InterPro DOMAIN/s:
Tetratricopeptide-like helical (InterPro:IPR011990),
Tetratricopeptide repeat-containing (InterPro:IPR013026),
Tetratricopeptide repeat (InterPro:IPR019734); BEST
Arabidopsis thaliana protein match is: Tetratricopeptide
repeat (TPR)-like superfamily protein (TAIR:AT1G07280.3);
Has 535 Blast hits to 340 proteins in 62 species: Archae -
10; Bacteria - 119; Metazoa - 2; Fungi - 0; Plants - 351;
Viruses - 0; Other Eukaryotes - 53 (source: NCBI BLink)."
/db_xref="Araport:AT2G29670"
/db_xref="TAIR:AT2G29670"
intron_pos 454:2 (1/1)
BEGIN
1 MGVKVASSST FLQWTTQPII HQSSSPSQTL ASGTITSPSK RRSTVHDGRF LSCRFVTQRL
61 NRSALFGTPS TKLHRPKSCE LWKSSSSSSR PIKTQSFRRV YSANLDPFSD EEFSKKIQEL
121 TLRFNIPHHD DDENSIEPPW NEMVHLSSIE MKANSVDLPL SLRIIKKKRQ WEEGVKQAGE
181 SACCSMNKAF SSMVFMIREL QSFTLHMREI LFYEDLQEIL LRVREEMQQS FVWLFQQVFS
241 ATPTLMVYVM ILLANFTVYS IGNNSSALAA VAPLPPTITE LTTVSETEET NVKFDSSVVK
301 TFFVSSPSGS IASVGGNNNG GGGNVKPVLS GTDGDGSDGS EQFRTIIPEG VSQLSSSNFG
361 SEPSVSGQDE HRLWNSMVEE AERMQYSNID DSLDQETRKR FVSHVEARVE AEEDTGYFKT
421 ELMYQTELSQ EPNNPLLLAN YAQFLYLVSN DHDRAEEYFK RAVGVEPKDA EAFSKYATFL
481 WRARDDLWAA EETFLEAIDA DPTNSYYAAN YANFLWNTGG DDTCFPLDDE SHEDTI
//