LOCUS AEC08272.1 449 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana tubulin beta-7 chain protein.
ACCESSION CP002685-3941
PROTEIN_ID AEC08272.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 19698289)
AUTHORS Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D.,
Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V.,
Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L.,
Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam,L.,
Tallon,L.J., Gill,J.E., Adams,M.D., Carrera,A.J., Creasy,T.H.,
Goodman,H.M., Somerville,C.R., Copenhaver,G.P., Preuss,D.,
Nierman,W.C., White,O., Eisen,J.A., Salzberg,S.L., Fraser,C.M. and
Venter,J.C.
TITLE Sequence and analysis of chromosome 2 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 761-768 (1999)
PUBMED 10617197
REFERENCE 2 (bases 1 to 19698289)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 19698289)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="2"
/ecotype="Columbia"
protein /gene="TUB7"
/locus_tag="AT2G29550"
/gene_synonym="F16P2.7"
/gene_synonym="F16P2_7"
/gene_synonym="tubulin beta-7 chain"
/inference="Similar to RNA sequence,
EST:INSD:DR265109.1,INSD:DR265067.1,INSD:ES021892.1,
INSD:EL180356.1,INSD:BP801668.1,INSD:ES075577.1,
INSD:EL239103.1,INSD:EL987387.1,INSD:ES055763.1,
INSD:ES037500.1,INSD:EH829723.1,INSD:ES118430.1,
INSD:DR265094.1,INSD:ES005428.1,INSD:DR265099.1,
INSD:DR265088.1,INSD:BP600223.1,INSD:DR265037.1,
INSD:DR265074.1,INSD:DR265053.1,INSD:ES079742.1,
INSD:EL998413.1,INSD:DR265072.1,INSD:ES004291.1,
INSD:BP663244.1,INSD:EL229667.1,INSD:DR265041.1,
INSD:ES011365.1,INSD:ES186486.1,INSD:EH956882.1,
INSD:EL223630.1,INSD:DR265056.1,INSD:DR265061.1,
INSD:AV820840.1,INSD:AV558522.1,INSD:BP653010.1,
INSD:DR265098.1,INSD:EL149534.1,INSD:BP800718.1,
INSD:ES004204.1,INSD:EL992964.1,INSD:BP572538.1,
INSD:BP809961.1,INSD:DR265108.1,INSD:DR265062.1,
INSD:ES200379.1,INSD:DR265052.1,INSD:DR265066.1,
INSD:ES120441.1,INSD:DR229165.1,INSD:BP605321.1,
INSD:ES111480.1,INSD:DR265060.1,INSD:DR265084.1,
INSD:BP565032.1,INSD:DR265058.1,INSD:BP647340.1,
INSD:DR372687.1,INSD:DR265103.1,INSD:DR265085.1,
INSD:DR265064.1,INSD:EL018244.1,INSD:DR265054.1,
INSD:BP817448.1,INSD:DR265073.1,INSD:DR265042.1,
INSD:DR265077.1,INSD:EL102420.1,INSD:EL337476.1,
INSD:EL330486.1,INSD:ES178361.1,INSD:DR265091.1,
INSD:ES029387.1,INSD:DR265050.1,INSD:DR265070.1,
INSD:ES139735.1,INSD:ES009406.1,INSD:BP832613.1,
INSD:DR265039.1,INSD:DR265101.1,INSD:ES049139.1,
INSD:AV533385.1,INSD:ES076710.1,INSD:AV561943.1,
INSD:EL021776.1,INSD:AV792444.1,INSD:EL288690.1,
INSD:EH864395.1,INSD:DR265081.1,INSD:DR265063.1,
INSD:ES199686.1,INSD:BP811427.1,INSD:DR265104.1,
INSD:DR265078.1,INSD:EL033284.1,INSD:DR265102.1,
INSD:ES052293.1,INSD:ES188824.1,INSD:BP649217.1,
INSD:EG486558.1,INSD:EL217045.1,INSD:AV532670.1,
INSD:AV818581.1,INSD:BP560887.2,INSD:DR265096.1,
INSD:BP787545.1,INSD:ES192268.1,INSD:EH992769.1,
INSD:EH825581.1,INSD:BP650785.1,INSD:DR265043.1,
INSD:ES108438.1,INSD:DR265082.1,INSD:EG473838.1,
INSD:DR265065.1,INSD:BP639131.1,INSD:CF651789.1,
INSD:EH943067.1,INSD:EH867244.1,INSD:EL024811.1,
INSD:ES076981.1,INSD:EG473837.1,INSD:ES040933.1,
INSD:DR265045.1,INSD:ES103190.1,INSD:ES090930.1,
INSD:EH856117.1,INSD:DR265079.1,INSD:DR265087.1,
INSD:ES059972.1,INSD:DR265059.1,INSD:EL337984.1,
INSD:DR265107.1,INSD:DR265036.1,INSD:ES183902.1,
INSD:DR265075.1,INSD:AV824036.1,INSD:ES117369.1,
INSD:EL214704.1,INSD:BP566416.1,INSD:EH952006.1,
INSD:BP803224.1,INSD:BP589959.1,INSD:DR265106.1,
INSD:DR265071.1,INSD:EL979813.1,INSD:EL329135.1,
INSD:DR265068.1,INSD:BP802719.1,INSD:DR265105.1,
INSD:BP655220.1,INSD:DR265089.1,INSD:DR265083.1,
INSD:AV519155.1,INSD:ES021380.1,INSD:BP640201.1,
INSD:BP845156.1,INSD:DR265100.1,INSD:BP570757.1,
INSD:ES172050.1,INSD:DR265069.1,INSD:DR265048.1,
INSD:AV564647.1,INSD:EH851008.1,INSD:ES175697.1,
INSD:DR265047.1,INSD:ES001756.1,INSD:EH911284.1,
INSD:AV565100.1,INSD:EH836362.1,INSD:DR265038.1,
INSD:EL319401.1,INSD:BP862595.1,INSD:BP839406.2,
INSD:DR265095.1,INSD:DR265040.1,INSD:BP656033.1,
INSD:ES139847.1,INSD:BP565646.1,INSD:DR265055.1,
INSD:ES015704.1,INSD:ES184869.1,INSD:EG486559.1,
INSD:BP579602.1,INSD:ES056500.1,INSD:ES155662.1,
INSD:BP804892.1,INSD:AV783660.1,INSD:DR265057.1,
INSD:EL062333.1,INSD:EH888965.1,INSD:DR265044.1,
INSD:DR265046.1,INSD:ES204597.1,INSD:AV785168.1,
INSD:DR265097.1,INSD:DR265110.1,INSD:EH939236.1,
INSD:DR265090.1,INSD:EL996093.1,INSD:BP640781.1"
/inference="similar to RNA sequence,
mRNA:INSD:BT001121.1,INSD:AF370568.1,INSD:AY085710.1,
INSD:AY090345.1"
/note="tubulin beta-7 chain (TUB7); FUNCTIONS IN:
structural constituent of cytoskeleton; INVOLVED IN:
response to cadmium ion, microtubule-based process,
response to salt stress; LOCATED IN: tubulin complex, cell
wall, plasma membrane, vacuole; EXPRESSED IN: 26 plant
structures; EXPRESSED DURING: 16 growth stages; CONTAINS
InterPro DOMAIN/s: Beta tubulin (InterPro:IPR002453),
Tubulin (InterPro:IPR000217), Tubulin/FtsZ, GTPase domain
(InterPro:IPR003008), Tubulin/FtsZ, N-terminal
(InterPro:IPR019746), Tubulin/FtsZ, C-terminal
(InterPro:IPR008280), Beta tubulin, autoregulation binding
site (InterPro:IPR013838), Tubulin, conserved site
(InterPro:IPR017975), Tubulin/FtsZ, 2-layer sandwich
domain (InterPro:IPR018316); BEST Arabidopsis thaliana
protein match is: tubulin beta chain 3 (TAIR:AT5G62700.1);
Has 23671 Blast hits to 23575 proteins in 4891 species:
Archae - 35; Bacteria - 44; Metazoa - 4475; Fungi - 14216;
Plants - 1547; Viruses - 0; Other Eukaryotes - 3354
(source: NCBI BLink)."
/db_xref="Araport:AT2G29550"
/db_xref="TAIR:AT2G29550"
intron_pos 132:1 (1/2)
intron_pos 222:1 (2/2)
BEGIN
1 MREILHIQGG QCGNQIGSKF WEVVNLEHGI DQTGRYVGDS ELQLERVNVY YNEASCGRYV
61 PRAVLMDLEP GTMDSVRSGP YGQIFRPDNF VFGQSGAGNN WAKGHYTEGA ELIDSVLDVV
121 RKEAENCDCL QGFQVCHSLG GGTGSGMGTL LISKIREEYP DRMMMTFSVF PSPKVSDTVV
181 EPYNATLSVH QLVENADECM VLDNEALYDI CFRTLKLSTP SFGDLNHLIS ATMSGVTCCL
241 RFPGQLNSDL RKLAVNLIPF PRLHFFMVGF APLTSRGSQQ YRNLTVPELT QQMWDAKNMM
301 CAADPRHGRY LTASAMFRGK MSTKEVDEQM LNVQNKNSSY FVEWIPNNVK STVCDIPPTG
361 LKMASTFIGN STSIQEMFRR VSEQFTAMFR RKAFLHWYTG EGMDEMEFTE AESNMNDLVS
421 EYQQYQDATA DEEGEYEEEE AEYEQEETY
//