LOCUS AEC08237.1 307 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana NAD-dependent epimerase/dehydratase
family protein protein.
ACCESSION CP002685-3900
PROTEIN_ID AEC08237.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 19698289)
AUTHORS Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D.,
Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V.,
Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L.,
Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam,L.,
Tallon,L.J., Gill,J.E., Adams,M.D., Carrera,A.J., Creasy,T.H.,
Goodman,H.M., Somerville,C.R., Copenhaver,G.P., Preuss,D.,
Nierman,W.C., White,O., Eisen,J.A., Salzberg,S.L., Fraser,C.M. and
Venter,J.C.
TITLE Sequence and analysis of chromosome 2 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 761-768 (1999)
PUBMED 10617197
REFERENCE 2 (bases 1 to 19698289)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 19698289)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="2"
/ecotype="Columbia"
protein /locus_tag="AT2G29340"
/gene_synonym="F16P2.28"
/gene_synonym="F16P2_28"
/inference="Similar to RNA sequence,
EST:INSD:EL254491.1,INSD:EL157481.1,INSD:EL136290.1,
INSD:DR365011.1,INSD:EL149844.1,INSD:EH864378.1,
INSD:DR365012.1,INSD:EL032058.1,INSD:EL322341.1,
INSD:DR365010.1,INSD:EL112711.1,INSD:EH932036.1,
INSD:EH943570.1,INSD:EL096013.1,INSD:DR365015.1,
INSD:EL084712.1,INSD:EH959815.1,INSD:EH965491.1,
INSD:EL185417.1,INSD:EH900019.1,INSD:EH848646.1,
INSD:DR365013.1,INSD:EL129627.1,INSD:ES175466.1,
INSD:EL062161.1,INSD:EH823237.1,INSD:AV821524.1,
INSD:EL110938.1,INSD:EH839749.1,INSD:EL063142.1,
INSD:EL131002.1,INSD:EL306482.1,INSD:EL205794.1,
INSD:EH963310.1,INSD:EH799027.1,INSD:ES007951.1,
INSD:EH926599.1,INSD:EL115026.1,INSD:DR365014.1,
INSD:ES166937.1,INSD:EL087612.1"
/inference="similar to RNA sequence, mRNA:INSD:BX819009.1"
/note="NAD-dependent epimerase/dehydratase family protein;
FUNCTIONS IN: oxidoreductase activity, binding, catalytic
activity; INVOLVED IN: oxidation reduction, metabolic
process; EXPRESSED IN: 22 plant structures; EXPRESSED
DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s:
NAD(P)-binding domain (InterPro:IPR016040),
Glucose/ribitol dehydrogenase (InterPro:IPR002347),
Short-chain dehydrogenase/reductase SDR
(InterPro:IPR002198); BEST Arabidopsis thaliana protein
match is: NAD(P)-binding Rossmann-fold superfamily protein
(TAIR:AT2G29320.1); Has 35333 Blast hits to 34131 proteins
in 2444 species: Archae - 798; Bacteria - 22429; Metazoa -
974; Fungi - 991; Plants - 531; Viruses - 0; Other
Eukaryotes - 9610 (source: NCBI BLink)."
/db_xref="Araport:AT2G29340"
/db_xref="TAIR:AT2G29340"
intron_pos 22:2 (1/5)
intron_pos 92:0 (2/5)
intron_pos 164:1 (3/5)
intron_pos 200:0 (4/5)
intron_pos 262:0 (5/5)
BEGIN
1 MDKRWSLKGM TALVTGGASG IGYAIVEELA GFGARIHVCD ISEAKLNQSL SEWEKKGFQV
61 SGSVCDVASR PEREELMQTV SSQFDGKLNI LVSNVGVIRS KPTTEYTEDD FAFHISSNVE
121 AAYHFSQLSH PLLKASGYGS IIFVSSIAGV ISFDAGSIYG LTKGALIQLA KNLACEWAKD
181 GIRANAVAPN VINTPLSQSY LEDVSFKKAL LSRTPLGRVG EPNEVASLVA FLCLPAASYI
241 TGQTICVDGG LTVNGFSYQP EEALLSRTSL RRVGEPNEVS SLVVFLCLPA ASYITGQMVK
301 PFVLMEV
//