LOCUS AEC08220.1 972 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana pumilio 2 protein.
ACCESSION CP002685-3878
PROTEIN_ID AEC08220.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 19698289)
AUTHORS Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D.,
Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V.,
Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L.,
Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam,L.,
Tallon,L.J., Gill,J.E., Adams,M.D., Carrera,A.J., Creasy,T.H.,
Goodman,H.M., Somerville,C.R., Copenhaver,G.P., Preuss,D.,
Nierman,W.C., White,O., Eisen,J.A., Salzberg,S.L., Fraser,C.M. and
Venter,J.C.
TITLE Sequence and analysis of chromosome 2 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 761-768 (1999)
PUBMED 10617197
REFERENCE 2 (bases 1 to 19698289)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 19698289)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="2"
/ecotype="Columbia"
protein /gene="PUM2"
/locus_tag="AT2G29190"
/gene_synonym="APUM2"
/gene_synonym="F16P2.43"
/gene_synonym="F16P2_43"
/gene_synonym="pumilio 2"
/inference="Similar to RNA sequence,
EST:INSD:CB261116.1,INSD:EH933993.1,INSD:EH949276.1,
INSD:EL025662.1,INSD:EL012726.1,INSD:EL205858.1,
INSD:BP793344.1,INSD:AU230264.1,INSD:ES110712.1,
INSD:BE528787.1,INSD:EL135656.1,INSD:AV559345.1,
INSD:BP623576.1,INSD:EL314338.1,INSD:EL237450.1,
INSD:BP788707.1,INSD:ES042370.1,INSD:ES113129.1,
INSD:ES018288.1,INSD:EL279275.1,INSD:BP617232.1,
INSD:EL066127.1,INSD:DR263460.1,INSD:BP599936.1,
INSD:ES080976.1,INSD:AV523782.1,INSD:ES032567.1,
INSD:EH833564.1,INSD:ES089742.1,INSD:BE525998.1,
INSD:EL198730.1,INSD:EL148546.1,INSD:ES033044.1,
INSD:EL297278.1,INSD:ES065991.1,INSD:ES006290.1,
INSD:ES214448.1,INSD:ES044455.1,INSD:AV804188.1,
INSD:BP665480.1,INSD:BE038565.1,INSD:AV829063.1,
INSD:EL106644.1,INSD:EL304590.1,INSD:ES075349.1,
INSD:AV523895.1,INSD:BP790537.1,INSD:BP790230.1,
INSD:EH930484.1"
/inference="similar to RNA sequence,
mRNA:INSD:AK226635.1,INSD:AY096653.1"
/note="pumilio 2 (PUM2); FUNCTIONS IN: mRNA binding, RNA
binding; INVOLVED IN: biological_process unknown; LOCATED
IN: cellular_component unknown; EXPRESSED IN: 22 plant
structures; EXPRESSED DURING: 11 growth stages; CONTAINS
InterPro DOMAIN/s: Nucleic acid binding NABP
(InterPro:IPR012940), Pumilio RNA-binding repeat
(InterPro:IPR001313), Armadillo-like helical
(InterPro:IPR011989), Armadillo-type fold
(InterPro:IPR016024); BEST Arabidopsis thaliana protein
match is: pumilio 1 (TAIR:AT2G29200.1); Has 3838 Blast
hits to 2002 proteins in 239 species: Archae - 0; Bacteria
- 4; Metazoa - 765; Fungi - 1352; Plants - 848; Viruses -
0; Other Eukaryotes - 869 (source: NCBI BLink)."
/db_xref="Araport:AT2G29190"
/db_xref="TAIR:AT2G29190"
intron_pos 209:0 (1/8)
intron_pos 643:2 (2/8)
intron_pos 691:0 (3/8)
intron_pos 727:0 (4/8)
intron_pos 798:0 (5/8)
intron_pos 835:0 (6/8)
intron_pos 900:0 (7/8)
intron_pos 958:1 (8/8)
BEGIN
1 MIPELGRRPM HRGNEDSSFG DDYEKEIGVL LGEQQRRQVE ADELERELNL YRSGSAPPTV
61 DGSVSAAGGL FSGGGGAPFL EFGGGNKGNG FGGDDEEFRK DPAYLSYYYA NMKLNPRLPP
121 PLMSREDLRV AQRLKGSSNV LGGVGDRRKV NDSQSLFSMP PGFDQRKQHE FEVEKTSASS
181 SEWDANGLIG LPGLGIGGKQ KSFADIFQAD MGHGHPVTKQ PSRPASRNTF DENVDSKNNL
241 SPSASQGIGA PSPYSYAAVL GSSLSRNGTP DPQAIARVPS PCLTPIGSGR VSSNDKRNTS
301 NQSPFNGGLN ESSDLVNALS GMNLSGSGGL DERGQAEQDV EKVRNYMFGL QGGHNEVNQH
361 GFPNKSDQAQ KATGLLRNSQ LRGAQGSTYN DGGGVATQYQ HLDSPNYCLN NYGLNPAVAS
421 MMANQLGTNN YSPVYENASA ASAMGFSGMD SRLHGGGYVS SGQNLSESRN LGRFSNRMMG
481 GGTGLQSHMA DPMYHQYADS LDLLNDPSMD VNFMGNSYMN MLELQRAYLG AQKSQYGVPY
541 KSGSPNSHTD YGSPTFGSYP GSPLAHHLLP NSLVSPCSPM RRGEVNMRYP SATRNYAGGV
601 MGSWHMDASL DEGFGSSMLE EFKSNKTRGF ELAEIAGHVV EFSSDQYGSR FIQQKLETAT
661 SDEKNMVYEE IMPHALALMT DVFGNYVIQK FFEHGLPPQR RELADKLFDN VLPLSLQMYG
721 CRVIQKAIEV VDLDQKIKMV KELDGHVMRC VRDQNGNHVV QKCIECVPEE NIEFIISTFF
781 GNVVTLSTHP YGCRVIQRVL EHCHDPDTQS KVMDEIMSTI SMLAQDQYGN YVIQHVLEHG
841 KPDERTVIIK ELAGKIVQMS QQKFASNVVE KCLTFGGPEE REFLVNEMLG TTDENEPLQA
901 MMKDQFANYV VQKVLETCDD QQRELILGRI KVHLNALKKY TYGKHIVARV EKLVAAGERR
961 MALQSLTQPQ MA
//