LOCUS AEC08199.1 133 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana Rab5-interacting family protein protein.
ACCESSION CP002685-3850
PROTEIN_ID AEC08199.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 19698289)
AUTHORS Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D.,
Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V.,
Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L.,
Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam,L.,
Tallon,L.J., Gill,J.E., Adams,M.D., Carrera,A.J., Creasy,T.H.,
Goodman,H.M., Somerville,C.R., Copenhaver,G.P., Preuss,D.,
Nierman,W.C., White,O., Eisen,J.A., Salzberg,S.L., Fraser,C.M. and
Venter,J.C.
TITLE Sequence and analysis of chromosome 2 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 761-768 (1999)
PUBMED 10617197
REFERENCE 2 (bases 1 to 19698289)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 19698289)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="2"
/ecotype="Columbia"
protein /locus_tag="AT2G29020"
/gene_synonym="T9I4.10"
/gene_synonym="T9I4_10"
/inference="Similar to RNA sequence,
EST:INSD:BP586221.1,INSD:AV831385.1,INSD:ES117422.1,
INSD:EH828081.1,INSD:EL177267.1,INSD:EL083506.1,
INSD:EH811057.1,INSD:ES025880.1,INSD:EL976965.1,
INSD:EL973607.1,INSD:EL988151.1,INSD:DR308695.1,
INSD:AV816302.1,INSD:BP622883.1,INSD:ES087666.1,
INSD:EL110351.1,INSD:DR225575.1,INSD:DR308696.1,
INSD:ES145875.1,INSD:ES053174.1,INSD:ES154915.1,
INSD:ES146891.1,INSD:BP664467.1,INSD:EL976867.1,
INSD:BP843894.1,INSD:ES159503.1,INSD:ES126355.1,
INSD:ES058676.1,INSD:EH901173.1,INSD:ES006154.1,
INSD:EH940477.1,INSD:ES118669.1,INSD:EL089757.1,
INSD:AV804349.1,INSD:EL198839.1,INSD:ES009075.1,
INSD:BP638370.1,INSD:ES040245.1,INSD:DR308697.1,
INSD:ES054985.1,INSD:EH956050.1,INSD:EH798582.1,
INSD:ES091049.1,INSD:EL100019.1,INSD:EL028069.1,
INSD:EL201763.1,INSD:ES054784.1,INSD:ES185129.1,
INSD:EL260651.1,INSD:ES020402.1,INSD:EH812794.1,
INSD:ES146600.1,INSD:ES085846.1,INSD:EL201806.1,
INSD:BP668169.1,INSD:BP795273.1,INSD:EL012234.1,
INSD:EH858730.1,INSD:ES008787.1,INSD:ES167290.1,
INSD:ES000944.1,INSD:EL238697.1,INSD:EH810042.1,
INSD:EL158981.1,INSD:ES058751.1,INSD:ES085175.1,
INSD:ES067861.1,INSD:ES066761.1,INSD:EL339522.1,
INSD:ES124987.1,INSD:EL975183.1,INSD:ES070909.1,
INSD:EL988748.1,INSD:ES111490.1,INSD:ES122023.1,
INSD:DR216419.1,INSD:ES037260.1,INSD:AV829092.1,
INSD:EL341487.1,INSD:DR308694.1,INSD:ES059210.1,
INSD:W43070.1,INSD:ES170013.1,INSD:EL119655.1,
INSD:DR308699.1,INSD:EH930439.1,INSD:EL982665.1,
INSD:EH936749.1,INSD:EL325708.1,INSD:EL075476.1,
INSD:ES021895.1,INSD:EL992944.1,INSD:ES063466.1,
INSD:ES007025.1,INSD:ES207016.1,INSD:EL123446.1,
INSD:ES025532.1,INSD:EH838429.1,INSD:EH974002.1,
INSD:ES144931.1,INSD:ES151087.1,INSD:ES165409.1,
INSD:EL009265.1,INSD:ES129196.1,INSD:EH859797.1,
INSD:EH935707.1,INSD:ES017048.1,INSD:EH838155.1,
INSD:EH845410.1,INSD:EL012139.1,INSD:EL033774.1,
INSD:AV815950.1,INSD:EL125089.1,INSD:EH819214.1,
INSD:ES043360.1,INSD:BP625316.1,INSD:EH978005.1,
INSD:ES089871.1,INSD:ES078180.1,INSD:ES033800.1,
INSD:BP788192.1,INSD:ES056954.1,INSD:DR371633.1,
INSD:DR308698.1,INSD:EH992937.1,INSD:ES181333.1,
INSD:EL243760.1,INSD:EL083177.1,INSD:ES017200.1,
INSD:EL232491.1,INSD:EL205668.1"
/inference="similar to RNA sequence,
mRNA:INSD:AY122888.1,INSD:AY084263.1,INSD:AY072014.1,
INSD:AK226975.1"
/note="Rab5-interacting family protein; CONTAINS InterPro
DOMAIN/s: Rab5-interacting (InterPro:IPR010742); BEST
Arabidopsis thaliana protein match is: Rab5-interacting
family protein (TAIR:AT5G59410.1); Has 196 Blast hits to
196 proteins in 85 species: Archae - 0; Bacteria - 0;
Metazoa - 128; Fungi - 0; Plants - 50; Viruses - 0; Other
Eukaryotes - 18 (source: NCBI BLink)."
/db_xref="Araport:AT2G29020"
/db_xref="TAIR:AT2G29020"
intron_pos 44:0 (1/3)
intron_pos 78:2 (2/3)
intron_pos 122:0 (3/3)
BEGIN
1 MKEGKSSKSS SQQEQHEQIY HQNSHLGSFN FAKLFDSEAS WDKDQLGDVL HWIRQVVGLL
61 CGLLWGAIPL VGGIWLLLFL AISSGIVYGY YALVLKIDEE DFGGHAALLQ DGLFASLSLF
121 LLAWILVYSL SSF
//