LOCUS AEC08188.1 145 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana RING/U-box superfamily protein protein.
ACCESSION CP002685-3836
PROTEIN_ID AEC08188.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 19698289)
AUTHORS Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D.,
Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V.,
Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L.,
Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam,L.,
Tallon,L.J., Gill,J.E., Adams,M.D., Carrera,A.J., Creasy,T.H.,
Goodman,H.M., Somerville,C.R., Copenhaver,G.P., Preuss,D.,
Nierman,W.C., White,O., Eisen,J.A., Salzberg,S.L., Fraser,C.M. and
Venter,J.C.
TITLE Sequence and analysis of chromosome 2 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 761-768 (1999)
PUBMED 10617197
REFERENCE 2 (bases 1 to 19698289)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 19698289)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="2"
/ecotype="Columbia"
protein /locus_tag="AT2G28920"
/gene_synonym="F8N16.21"
/gene_synonym="F8N16_21"
/inference="Similar to RNA sequence,
EST:INSD:DR750962.1,INSD:DR750963.1,INSD:DR750975.1"
/inference="similar to RNA sequence, mRNA:INSD:BT030073.1"
/note="RING/U-box superfamily protein; FUNCTIONS IN: zinc
ion binding; CONTAINS InterPro DOMAIN/s: Zinc finger,
RING-type (InterPro:IPR001841), Zinc finger, C3HC4
RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana
protein match is: RING/U-box superfamily protein
(TAIR:AT5G41400.1); Has 7703 Blast hits to 7686 proteins
in 274 species: Archae - 0; Bacteria - 0; Metazoa - 1826;
Fungi - 508; Plants - 4325; Viruses - 47; Other Eukaryotes
- 997 (source: NCBI BLink)."
/db_xref="Araport:AT2G28920"
/db_xref="TAIR:AT2G28920"
BEGIN
1 MASSCCGDYV AAASPEMSTV MGSESIVLRL LCVVFIILFY GSIILLCFVM YPKLPKEEIG
61 DEEAGEPLPP AVRLTKCGGG DGGDGDGVKA DVCVICLEDF KVNDVVRVLV RCKHVFHVDC
121 IDSWCFYKLT CPICRAPFQW FGGDW
//