LOCUS AEC08168.1 343 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana UDP-XYL synthase 6 protein.
ACCESSION CP002685-3812
PROTEIN_ID AEC08168.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 19698289)
AUTHORS Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D.,
Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V.,
Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L.,
Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam,L.,
Tallon,L.J., Gill,J.E., Adams,M.D., Carrera,A.J., Creasy,T.H.,
Goodman,H.M., Somerville,C.R., Copenhaver,G.P., Preuss,D.,
Nierman,W.C., White,O., Eisen,J.A., Salzberg,S.L., Fraser,C.M. and
Venter,J.C.
TITLE Sequence and analysis of chromosome 2 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 761-768 (1999)
PUBMED 10617197
REFERENCE 2 (bases 1 to 19698289)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 19698289)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="2"
/ecotype="Columbia"
protein /gene="UXS6"
/locus_tag="AT2G28760"
/gene_synonym="F8N16.5"
/gene_synonym="F8N16_5"
/gene_synonym="UDP-XYL synthase 6"
/inference="Similar to RNA sequence,
EST:INSD:DR382867.1,INSD:DR356978.1,INSD:EH883008.1,
INSD:DR382802.1,INSD:DR356977.1,INSD:BX841017.1,
INSD:DR350156.1,INSD:AA394355.1,INSD:DR356979.1,
INSD:AV814439.1,INSD:BP788388.1,INSD:DR350155.1"
/inference="similar to RNA sequence,
mRNA:INSD:AY128899.1,INSD:AJ276736.1,INSD:AY099703.1,
INSD:BX818916.1"
/note="UDP-XYL synthase 6 (UXS6); FUNCTIONS IN: coenzyme
binding, binding, catalytic activity; INVOLVED IN:
cellular metabolic process, nucleotide-sugar metabolic
process, metabolic process; LOCATED IN: plasma membrane;
EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13
growth stages; CONTAINS InterPro DOMAIN/s: NAD-dependent
epimerase/dehydratase (InterPro:IPR001509), NAD(P)-binding
domain (InterPro:IPR016040); BEST Arabidopsis thaliana
protein match is: UDP-XYL synthase 5 (TAIR:AT3G46440.2);
Has 45408 Blast hits to 45356 proteins in 3037 species:
Archae - 861; Bacteria - 26677; Metazoa - 782; Fungi -
385; Plants - 1435; Viruses - 88; Other Eukaryotes - 15180
(source: NCBI BLink)."
/db_xref="Araport:AT2G28760"
/db_xref="TAIR:AT2G28760"
intron_pos 29:0 (1/8)
intron_pos 87:1 (2/8)
intron_pos 118:0 (3/8)
intron_pos 169:1 (4/8)
intron_pos 195:1 (5/8)
intron_pos 226:2 (6/8)
intron_pos 249:0 (7/8)
intron_pos 284:0 (8/8)
BEGIN
1 MASNSSNGTT TTKPPPMPSP LRNSKFFQSN MRILVTGGAG FIGSHLVDKL MQNEKNEVIV
61 ADNYFTGSKD NLKKWIGHPR FELIRHDVTE PLFVEVDQIY HLACPASPIF YKYNPVKTIK
121 TNVIGTLNML GLAKRVGARI LLTSTSEVYG DPLVHPQTES YWGNVNPIGV RSCYDEGKRV
181 AETLMFDYHR QHGIEIRIAR IFNTYGPRMN IDDGRVVSNF IAQALRGEAL TVQKPGTQTR
241 SFCYVSDMVE GLMRLMEGDQ TGPINIGNPG EFTMVELAET VKELIKPDVE IKMVENTPDD
301 PRQRKPDISK AKEVLGWEPK VKLREGLPLM EEDFRLRLGV PKK
//