LOCUS AEC08161.1 329 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana AGAMOUS-like 46 protein.
ACCESSION CP002685-3803
PROTEIN_ID AEC08161.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 19698289)
AUTHORS Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D.,
Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V.,
Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L.,
Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam,L.,
Tallon,L.J., Gill,J.E., Adams,M.D., Carrera,A.J., Creasy,T.H.,
Goodman,H.M., Somerville,C.R., Copenhaver,G.P., Preuss,D.,
Nierman,W.C., White,O., Eisen,J.A., Salzberg,S.L., Fraser,C.M. and
Venter,J.C.
TITLE Sequence and analysis of chromosome 2 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 761-768 (1999)
PUBMED 10617197
REFERENCE 2 (bases 1 to 19698289)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 19698289)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="2"
/ecotype="Columbia"
protein /gene="AGL46"
/locus_tag="AT2G28700"
/gene_synonym="AGAMOUS-like 46"
/gene_synonym="T11P11.1"
/gene_synonym="T11P11_1"
/inference="Similar to RNA sequence,
EST:INSD:EG428531.1,INSD:EG428526.1,INSD:EG433578.1,
INSD:EG428529.1,INSD:EG428524.1,INSD:EG433576.1,
INSD:EG428525.1,INSD:EG433580.1"
/inference="similar to RNA sequence, mRNA:INSD:AY291206.2"
/note="AGAMOUS-like 46 (AGL46); FUNCTIONS IN: DNA binding,
sequence-specific DNA binding transcription factor
activity; INVOLVED IN: regulation of transcription,
DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN:
endosperm; CONTAINS InterPro DOMAIN/s: Transcription
factor, MADS-box (InterPro:IPR002100); BEST Arabidopsis
thaliana protein match is: MADS-box transcription factor
family protein (TAIR:AT3G05860.1); Has 35333 Blast hits to
34131 proteins in 2444 species: Archae - 798; Bacteria -
22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses -
0; Other Eukaryotes - 9610 (source: NCBI BLink)."
/db_xref="Araport:AT2G28700"
/db_xref="TAIR:AT2G28700"
intron_pos 253:0 (1/2)
intron_pos 287:0 (2/2)
BEGIN
1 MARKKLNLTY IFNDRMRKRS FKQRREGFLK KLNDLKVLCD VNACAVVYNP FNSNPDVWPS
61 KSEVNNIIKK FEMLPETQKK VKSVNHEEFL NLYISKVEKQ SKKLIVENKE TCLKEVMFKC
121 LGGNMGDFVM NDNDRLDLCK FIDHYLRNLY HHKNVTLNNP NFEIGESSSL MDMAPTATTG
181 NMATTVVDEG MTPLLIAEGS SSSFLNSPLF NSPQLTNELQ LIVSQNHRLE NSLASNLFFS
241 EGQDICIPDM NQSIIPSNQG AEHVDFLESN FLPNNNQEVY IPVMDQDEVY NPNQNHYENQ
301 QGFIDEMMKY AEKTSFPWMV ENHCYNHNQ
//