LOCUS AEC08160.1 231 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana TOX high mobility group box protein,
putative (DUF1635) protein.
ACCESSION CP002685-3802
PROTEIN_ID AEC08160.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 19698289)
AUTHORS Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D.,
Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V.,
Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L.,
Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam,L.,
Tallon,L.J., Gill,J.E., Adams,M.D., Carrera,A.J., Creasy,T.H.,
Goodman,H.M., Somerville,C.R., Copenhaver,G.P., Preuss,D.,
Nierman,W.C., White,O., Eisen,J.A., Salzberg,S.L., Fraser,C.M. and
Venter,J.C.
TITLE Sequence and analysis of chromosome 2 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 761-768 (1999)
PUBMED 10617197
REFERENCE 2 (bases 1 to 19698289)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 19698289)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="2"
/ecotype="Columbia"
protein /locus_tag="AT2G28690"
/gene_synonym="T8O18.2"
/gene_synonym="T8O18_2"
/inference="Similar to RNA sequence,
EST:INSD:EG441074.1,INSD:EG441937.1,INSD:EG441334.1,
INSD:EG441899.1,INSD:EG441940.1,INSD:EG441938.1,
INSD:EG441322.1,INSD:EG441332.1,INSD:EG441318.1,
INSD:EG441934.1,INSD:EG441933.1,INSD:EG441337.1,
INSD:EG441321.1,INSD:EG448762.1,INSD:EG441073.1,
INSD:EG441935.1,INSD:EG441323.1,INSD:EG441936.1,
INSD:EG441319.1,INSD:EG441336.1,INSD:EG441939.1,
INSD:EG441335.1"
/inference="similar to RNA sequence,
mRNA:INSD:BX821024.1,INSD:AY102556.1,INSD:AY649292.1"
/note="Protein of unknown function (DUF1635); CONTAINS
InterPro DOMAIN/s: Protein of unknown function DUF1635
(InterPro:IPR012862); BEST Arabidopsis thaliana protein
match is: Protein of unknown function (DUF1635)
(TAIR:AT5G59760.1); Has 114 Blast hits to 114 proteins in
19 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi -
0; Plants - 102; Viruses - 0; Other Eukaryotes - 12
(source: NCBI BLink)."
/db_xref="Araport:AT2G28690"
/db_xref="TAIR:AT2G28690"
intron_pos 13:0 (1/1)
BEGIN
1 MEELGSIWFY QESMDELRQK LQYSSFELEA VKAKANEETK LHQEEVKNLL HLLKLARQER
61 DEAKDQLQKL LTIKTNSSIT ESNSHGSSPV DSFFEPVSSS EFSNFNMVPE PINQVKFKNR
121 QQLVNRNLKK IDPVDALMDE IIKGKALPEK GKLLQTVMES GPLLQTLLVA GPLPRWRNPP
181 PLQQSFRVPP ISNSYGCLPA TTTTSMLNFR GCSVPRIATG IEVATKRQRF H
//