LOCUS AEC08145.1 536 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana transmembrane protein, putative (
DUF247) protein.
ACCESSION CP002685-3780
PROTEIN_ID AEC08145.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 19698289)
AUTHORS Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D.,
Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V.,
Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L.,
Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam,L.,
Tallon,L.J., Gill,J.E., Adams,M.D., Carrera,A.J., Creasy,T.H.,
Goodman,H.M., Somerville,C.R., Copenhaver,G.P., Preuss,D.,
Nierman,W.C., White,O., Eisen,J.A., Salzberg,S.L., Fraser,C.M. and
Venter,J.C.
TITLE Sequence and analysis of chromosome 2 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 761-768 (1999)
PUBMED 10617197
REFERENCE 2 (bases 1 to 19698289)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 19698289)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="2"
/ecotype="Columbia"
protein /locus_tag="AT2G28580"
/gene_synonym="T8O18.13"
/gene_synonym="T8O18_13"
/inference="Similar to RNA sequence,
EST:INSD:EG419695.1,INSD:EG419694.1,INSD:EG422587.1,
INSD:EG422595.1,INSD:EG422577.1,INSD:EG422579.1,
INSD:EG422576.1,INSD:EG419700.1,INSD:EG422578.1,
INSD:EG422586.1,INSD:EG422554.1,INSD:EG422529.1,
INSD:EG419699.1,INSD:EG422625.1,INSD:EG422627.1,
INSD:EG422549.1,INSD:EG419692.1,INSD:EG419696.1"
/inference="similar to RNA sequence, mRNA:INSD:AY773851.1"
/note="Plant protein of unknown function (DUF247);
CONTAINS InterPro DOMAIN/s: Protein of unknown function
DUF247, plant (InterPro:IPR004158); BEST Arabidopsis
thaliana protein match is: Plant protein of unknown
function (DUF247) (TAIR:AT2G44930.1); Has 1063 Blast hits
to 972 proteins in 18 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 1063; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink)."
/db_xref="Araport:AT2G28580"
/db_xref="TAIR:AT2G28580"
intron_pos 4:0 (1/6)
intron_pos 22:0 (2/6)
intron_pos 39:0 (3/6)
intron_pos 56:0 (4/6)
intron_pos 153:2 (5/6)
intron_pos 431:1 (6/6)
BEGIN
1 MIQSSESLGM VMKREYIKDD EHHKSLGTAL GEILKHNEPS TSLSTVLGEM FKNNEEKEHI
61 FSDLERGTML TRPMGEGYIQ YLRLSKETTQ PADSKIPGLW SSSVRPEFCC IYRVPDRLRK
121 VNPEAYTPQM LLIGPLHHSK KAEALKRYKT DLRYLNYLNM ELHKKKCLDS IADIYGDQPV
181 KEFRRIIEIN EKFIRDSYAE STIWINTKDF VEMILHDSVF ILLFFIQTGS TLNFNKKEDI
241 LFNQSRLINA TAILEDLILL ENQLPYALLE KLFEPFSSNV NTKETFRDIT LRAFRFEGKI
301 KEEVRFQHFT DLFRCVRVST LSLTEEQINI AKNEPPKSRK IMYNADKLDS AGVNFVNVDE
361 ENDLSLVITF KDGILKMPCF TVEDNTERVV RNLMALEQCH YPRTTFVCDY ISFLDFLINT
421 DQDVDLLAKK GIVKNWLGHQ GSVTEMVNKL CLGLVDFGSH YSDIVENLNK HYDNRLNRSV
481 GTLRRVYFKD LWTGTATIAA VVLLVLTLIQ TVASILQVMM QNDNKSPPPP APSRGL
//