LOCUS AEC08143.1 243 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana DNA repair (Rad51) family protein protein.
ACCESSION CP002685-3775
PROTEIN_ID AEC08143.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 19698289)
AUTHORS Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D.,
Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V.,
Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L.,
Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam,L.,
Tallon,L.J., Gill,J.E., Adams,M.D., Carrera,A.J., Creasy,T.H.,
Goodman,H.M., Somerville,C.R., Copenhaver,G.P., Preuss,D.,
Nierman,W.C., White,O., Eisen,J.A., Salzberg,S.L., Fraser,C.M. and
Venter,J.C.
TITLE Sequence and analysis of chromosome 2 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 761-768 (1999)
PUBMED 10617197
REFERENCE 2 (bases 1 to 19698289)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 19698289)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="2"
/ecotype="Columbia"
protein /gene="RAD51B"
/locus_tag="AT2G28560"
/gene_synonym="ATRAD51B"
/gene_synonym="T17D12.12"
/gene_synonym="T17D12_12"
/inference="Similar to RNA sequence, EST:INSD:BE530642.1"
/inference="similar to RNA sequence, mRNA:INSD:AB194810.1"
/note="RAD51B; CONTAINS InterPro DOMAIN/s: DNA
recombination/repair protein RecA/RadB, ATP-binding domain
(InterPro:IPR020588), ATPase, AAA+ type, core
(InterPro:IPR003593), DNA recombination and repair protein
Rad51, C-terminal (InterPro:IPR013632); BEST Arabidopsis
thaliana protein match is: homolog of RAD51 D
(TAIR:AT1G07745.2); Has 2570 Blast hits to 2570 proteins
in 515 species: Archae - 541; Bacteria - 205; Metazoa -
686; Fungi - 429; Plants - 272; Viruses - 16; Other
Eukaryotes - 421 (source: NCBI BLink)."
/db_xref="Araport:AT2G28560"
/db_xref="TAIR:AT2G28560"
intron_pos 35:0 (1/8)
intron_pos 86:0 (2/8)
intron_pos 120:2 (3/8)
intron_pos 142:0 (4/8)
intron_pos 160:2 (5/8)
intron_pos 187:2 (6/8)
intron_pos 207:2 (7/8)
intron_pos 238:1 (8/8)
BEGIN
1 MTEFELMELL DVGMKEIRSA ISFISEATSP PCQSARSLLE KKVENEHLSG HLPTHLKGLD
61 DTLCGGIPFG VLTELVGPPG IGKSQFCMKL ALSASFPVAY GGLDGRVIYI DVESKFSSRR
121 VIEMGLESFP EVFHLKGMAQ EMAGRILVLR PTSLANFTES IQELKNSILQ NQVKLLVIDS
181 MTALLSGENK PGAQRQPQLG WHISFLKSLA EFSRIPIVVT NQVRSQNRDE TSQYSFQDFL
241 CNS
//