LOCUS AEC08140.1 371 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana DNA repair (Rad51) family protein protein.
ACCESSION CP002685-3774
PROTEIN_ID AEC08140.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 19698289)
AUTHORS Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D.,
Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V.,
Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L.,
Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam,L.,
Tallon,L.J., Gill,J.E., Adams,M.D., Carrera,A.J., Creasy,T.H.,
Goodman,H.M., Somerville,C.R., Copenhaver,G.P., Preuss,D.,
Nierman,W.C., White,O., Eisen,J.A., Salzberg,S.L., Fraser,C.M. and
Venter,J.C.
TITLE Sequence and analysis of chromosome 2 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 761-768 (1999)
PUBMED 10617197
REFERENCE 2 (bases 1 to 19698289)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 19698289)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="2"
/ecotype="Columbia"
protein /gene="RAD51B"
/locus_tag="AT2G28560"
/gene_synonym="ATRAD51B"
/gene_synonym="T17D12.12"
/gene_synonym="T17D12_12"
/inference="similar to RNA sequence, mRNA:INSD:AJ549435.1"
/note="RAD51B; CONTAINS InterPro DOMAIN/s: DNA
recombination/repair protein RecA/RadB, ATP-binding domain
(InterPro:IPR020588), ATPase, AAA+ type, core
(InterPro:IPR003593), DNA recombination and repair
protein, RecA-like (InterPro:IPR016467), DNA recombination
and repair protein Rad51, C-terminal (InterPro:IPR013632);
BEST Arabidopsis thaliana protein match is: RAS associated
with diabetes protein 51C (TAIR:AT2G45280.2); Has 2717
Blast hits to 2715 proteins in 543 species: Archae - 539;
Bacteria - 255; Metazoa - 717; Fungi - 449; Plants - 276;
Viruses - 18; Other Eukaryotes - 463 (source: NCBI
BLink)."
/db_xref="Araport:AT2G28560"
/db_xref="TAIR:AT2G28560"
intron_pos 29:0 (1/10)
intron_pos 67:0 (2/10)
intron_pos 118:0 (3/10)
intron_pos 152:2 (4/10)
intron_pos 174:0 (5/10)
intron_pos 192:2 (6/10)
intron_pos 219:2 (7/10)
intron_pos 239:2 (8/10)
intron_pos 270:1 (9/10)
intron_pos 310:1 (10/10)
BEGIN
1 MANKLIGEMG LHTKISNIFA ARNIITAKDA LSMTEFELME LLDVGMKEIR SAISFISEAT
61 SPPCQSARSL LEKKVENEHL SGHLPTHLKG LDDTLCGGIP FGVLTELVGP PGIGKSQFCM
121 KLALSASFPV AYGGLDGRVI YIDVESKFSS RRVIEMGLES FPEVFHLKGM AQEMAGRILV
181 LRPTSLANFT ESIQELKNSI LQNQVKLLVI DSMTALLSGE NKPGAQRQPQ LGWHISFLKS
241 LAEFSRIPIV VTNQVRSQNR DETSQYSFQA KVKDEFKDNT KTYDSHLVAA LGINWAHAVT
301 IRLVLEAKSG QRIIKVAKSP MSPPLAFPFH ITSAGISLLS DNGTELKGPG INTIHARGIV
361 DPDYVALFRT F
//