LOCUS AEC08133.1 288 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana Dof-type zinc finger DNA-binding
family protein protein.
ACCESSION CP002685-3760
PROTEIN_ID AEC08133.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 19698289)
AUTHORS Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D.,
Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V.,
Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L.,
Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam,L.,
Tallon,L.J., Gill,J.E., Adams,M.D., Carrera,A.J., Creasy,T.H.,
Goodman,H.M., Somerville,C.R., Copenhaver,G.P., Preuss,D.,
Nierman,W.C., White,O., Eisen,J.A., Salzberg,S.L., Fraser,C.M. and
Venter,J.C.
TITLE Sequence and analysis of chromosome 2 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 761-768 (1999)
PUBMED 10617197
REFERENCE 2 (bases 1 to 19698289)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 19698289)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="2"
/ecotype="Columbia"
protein /locus_tag="AT2G28510"
/gene_synonym="T17D12.7"
/gene_synonym="T17D12_7"
/inference="Similar to RNA sequence,
EST:INSD:DR322977.1,INSD:BP567484.1,INSD:BP856632.1,
INSD:ES131600.1,INSD:DR372555.1,INSD:DR322978.1,
INSD:DR322973.1,INSD:EL276521.1,INSD:CB258629.1,
INSD:ES116790.1,INSD:DR322976.1,INSD:DR322979.1,
INSD:AV566287.1,INSD:DR322980.1,INSD:DR322975.1,
INSD:AV816190.1,INSD:AV831487.1,INSD:EG492939.1,
INSD:DR322974.1"
/inference="similar to RNA sequence,
mRNA:INSD:AY070421.1,INSD:AY085635.1"
/note="Dof-type zinc finger DNA-binding family protein;
FUNCTIONS IN: DNA binding, sequence-specific DNA binding
transcription factor activity; INVOLVED IN: regulation of
transcription; LOCATED IN: nucleolus; EXPRESSED IN: 22
plant structures; EXPRESSED DURING: 13 growth stages;
CONTAINS InterPro DOMAIN/s: Zinc finger, Dof-type
(InterPro:IPR003851); BEST Arabidopsis thaliana protein
match is: TARGET OF MONOPTEROS 6 (TAIR:AT5G60200.1); Has
1531 Blast hits to 1461 proteins in 73 species: Archae -
0; Bacteria - 1; Metazoa - 1; Fungi - 8; Plants - 1087;
Viruses - 0; Other Eukaryotes - 434 (source: NCBI BLink)."
/db_xref="Araport:AT2G28510"
/db_xref="TAIR:AT2G28510"
intron_pos 6:0 (1/1)
BEGIN
1 MDPEQEISNE TLETILVSST KGSNNNNKKM EEEMKKKVSR GELGGEAQNC PRCESPNTKF
61 CYYNNYSLSQ PRYFCKSCRR YWTKGGTLRN VPVGGGCRRN KRSSSSAFSK NNNNKSINFH
121 TDPLQNPLIT GMPPSSFGYD HSIDLNLAFA TLQKHHLSSQ ATTPSFGFGG DLSIYGNSTN
181 DVGIFGGQNG TYNNSLCYGF MSGNGNNNQN EIKMASTLGM SLEGNERKQE NVNNNNNNSE
241 NPSKVFWGFP WQMTGDSAGV VPEIDPGRES WNGMVSSWNN GLLNTPLV
//