LOCUS AEC08125.1 804 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana zinc finger (CCCH-type) family protein
protein.
ACCESSION CP002685-3749
PROTEIN_ID AEC08125.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 19698289)
AUTHORS Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D.,
Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V.,
Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L.,
Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam,L.,
Tallon,L.J., Gill,J.E., Adams,M.D., Carrera,A.J., Creasy,T.H.,
Goodman,H.M., Somerville,C.R., Copenhaver,G.P., Preuss,D.,
Nierman,W.C., White,O., Eisen,J.A., Salzberg,S.L., Fraser,C.M. and
Venter,J.C.
TITLE Sequence and analysis of chromosome 2 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 761-768 (1999)
PUBMED 10617197
REFERENCE 2 (bases 1 to 19698289)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 19698289)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="2"
/ecotype="Columbia"
protein /locus_tag="AT2G28450"
/gene_synonym="T1B3.3"
/gene_synonym="T1B3_3"
/note="zinc finger (CCCH-type) family protein; FUNCTIONS
IN: zinc ion binding, RNA methyltransferase activity,
nucleic acid binding; INVOLVED IN: RNA processing; LOCATED
IN: cellular_component unknown; EXPRESSED IN: 22 plant
structures; EXPRESSED DURING: 13 growth stages; CONTAINS
InterPro DOMAIN/s: Zinc finger, CCCH-type
(InterPro:IPR000571), (Uracil-5)-methyltransferase
(InterPro:IPR010280); BEST Arabidopsis thaliana protein
match is: RNA methyltransferase family protein
(TAIR:AT3G21300.1)."
/db_xref="Araport:AT2G28450"
/db_xref="TAIR:AT2G28450"
intron_pos 194:0 (1/12)
intron_pos 225:0 (2/12)
intron_pos 289:0 (3/12)
intron_pos 313:1 (4/12)
intron_pos 357:2 (5/12)
intron_pos 409:0 (6/12)
intron_pos 437:0 (7/12)
intron_pos 478:0 (8/12)
intron_pos 537:0 (9/12)
intron_pos 582:0 (10/12)
intron_pos 614:0 (11/12)
intron_pos 723:2 (12/12)
BEGIN
1 METSSIEINE LPLATKTQTP PASVEPIPME TSSIDELPSS DSNATDNIEA VGEKRKRADE
61 DEKTNLESSD TKITTPSPWW KTSLCSYFRR EASCSHGNEC KYAHGEAELR MKPDNTWDPT
121 SERGKKAKAM KMSEHEEKEE DEVLFTEQMM ESIDGDEGGG GSVSVVDLSL SKCLVHLPNK
181 WQSDELKKFL GEQGVLYKSA KKRRGMIVGF VTFENAEQLQ SGVEILDGKT VNSSNLKIAD
241 VLPRTFDKND ARKSVKSARD AVTPLAYLSY ADQLEQKKTS IGQMLKKLAR NARKACPNGN
301 SLPQWVLTSR DRGGLACNLE GIIESPITNG YRNKCEFSVG LSLQGKPTVG FSLGSFCAGV
361 TAVEEPVDCP NVSKIASQYA SIFQKFIENS KFQVWNRFQH SGFWRQLTVR EGRKPGVFSN
421 DEDAITRIAE VMLMVQVCLT GSDEAEVATE FEELAKAFAE GARASSPTLP LTVLVVQNHS
481 GISNVAPPDA PLQVLAIPIS DNGTDQEQTT NVLTEARIHD HINNLRFSIS PTAFFQVNTV
541 TAEKLYSIAG DWADLGPDTL LFDVCCGTGT IGLTLAHRVG MVIGIEMNAS AVADAERNAT
601 INGISNCKFI CSKAEDVMSS LLKQYLDVTQ MEEAKPLSNA NDDLNKQIPS TEEMTNSEHV
661 ADQNLPPSNT QVEELQDNEQ KDSSSLEPEK TTKPQFKNVV AIVDPPRSGL HPAVIKALRT
721 HPRYISCNPE TLVANAIELC TPSFDEPDRG NKNYRGRKKI GIAALARHRA KSMPTSEAFR
781 PVKAMAVDLF PHTDHCEMVM LLER
//