LOCUS AEC08081.1 448 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana Exostosin family protein protein.
ACCESSION CP002685-3688
PROTEIN_ID AEC08081.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 19698289)
AUTHORS Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D.,
Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V.,
Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L.,
Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam,L.,
Tallon,L.J., Gill,J.E., Adams,M.D., Carrera,A.J., Creasy,T.H.,
Goodman,H.M., Somerville,C.R., Copenhaver,G.P., Preuss,D.,
Nierman,W.C., White,O., Eisen,J.A., Salzberg,S.L., Fraser,C.M. and
Venter,J.C.
TITLE Sequence and analysis of chromosome 2 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 761-768 (1999)
PUBMED 10617197
REFERENCE 2 (bases 1 to 19698289)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 19698289)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="2"
/ecotype="Columbia"
protein /gene="FRA8"
/locus_tag="AT2G28110"
/gene_synonym="F24D13.10"
/gene_synonym="F24D13_10"
/gene_synonym="FRAGILE FIBER 8"
/gene_synonym="IRREGULAR XYLEM 7"
/gene_synonym="IRX7"
/inference="Similar to RNA sequence,
EST:INSD:CB260607.1,INSD:BX839418.1,INSD:AI999298.1,
INSD:AV810533.1,INSD:AV830184.1,INSD:BE529147.1,
INSD:BP810143.1,INSD:EL046195.1,INSD:BP609397.1,
INSD:BX839274.1,INSD:BP612360.1"
/inference="similar to RNA sequence,
mRNA:INSD:BX819673.1,INSD:DQ182567.1"
/note="FRAGILE FIBER 8 (FRA8); CONTAINS InterPro DOMAIN/s:
Exostosin-like (InterPro:IPR004263); BEST Arabidopsis
thaliana protein match is: FRA8 homolog
(TAIR:AT5G22940.1); Has 35333 Blast hits to 34131 proteins
in 2444 species: Archae - 798; Bacteria - 22429; Metazoa -
974; Fungi - 991; Plants - 531; Viruses - 0; Other
Eukaryotes - 9610 (source: NCBI BLink)."
/db_xref="Araport:AT2G28110"
/db_xref="TAIR:AT2G28110"
intron_pos 89:1 (1/3)
intron_pos 212:0 (2/3)
intron_pos 295:2 (3/3)
BEGIN
1 MTTHKHRRTE KNLCFKQYYK WILCFILTLY FFASFFVDHD QDHRSSTSIS KHLLTNHKPK
61 LFASRAMFES KIHDHKLGFT SQQPNIKTDV FNNLKIYVYD LPSKFNKDWL ANDRCTNHLF
121 AAEVALHKAF LSLEGDVRTE DPYEADFFFV PVYVSCNFST INGFPAIGHA RSLINDAIKL
181 VSTQYPFWNR TSGSDHVFTA THDFGSCFHT MEDRAIADGV PIFLRNSIIL QTFGVTFNHP
241 CQEVENVVIP PYISPESLHK TQKNIPVTKE RDIWVFFRGK MELHPKNISG RFYSKRVRTN
301 IWRSYGGDRR FYLQRQRFAG YQSEIARSVF CLCPLGWAPW SPRLVESVAL GCVPVIIADG
361 IRLPFPSTVR WPDISLTVAE RDVGKLGDIL EHVAATNLSV IQRNLEDPSV RRALMFNVPS
421 REGDATWQVL EALSKKLNRS VRRSNSFL
//