LOCUS AEC08062.1 237 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana RING/U-box superfamily protein protein.
ACCESSION CP002685-3660
PROTEIN_ID AEC08062.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 19698289)
AUTHORS Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D.,
Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V.,
Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L.,
Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam,L.,
Tallon,L.J., Gill,J.E., Adams,M.D., Carrera,A.J., Creasy,T.H.,
Goodman,H.M., Somerville,C.R., Copenhaver,G.P., Preuss,D.,
Nierman,W.C., White,O., Eisen,J.A., Salzberg,S.L., Fraser,C.M. and
Venter,J.C.
TITLE Sequence and analysis of chromosome 2 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 761-768 (1999)
PUBMED 10617197
REFERENCE 2 (bases 1 to 19698289)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 19698289)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="2"
/ecotype="Columbia"
protein /locus_tag="AT2G27940"
/gene_synonym="T1E2.14"
/gene_synonym="T1E2_14"
/inference="Similar to RNA sequence,
EST:INSD:AU230711.1,INSD:BP659367.1,INSD:AU239406.1"
/inference="similar to RNA sequence,
mRNA:INSD:AK118539.1,INSD:BT005256.1"
/note="RING/U-box superfamily protein; FUNCTIONS IN: zinc
ion binding; EXPRESSED IN: leaf apex, root, carpel, leaf;
EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis;
CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type
(InterPro:IPR001841), Zinc finger, C3HC4 RING-type
(InterPro:IPR018957); BEST Arabidopsis thaliana protein
match is: RING/U-box superfamily protein
(TAIR:AT3G05200.1); Has 9623 Blast hits to 9595 proteins
in 286 species: Archae - 0; Bacteria - 0; Metazoa - 2405;
Fungi - 805; Plants - 5009; Viruses - 51; Other Eukaryotes
- 1353 (source: NCBI BLink)."
/db_xref="Araport:AT2G27940"
/db_xref="TAIR:AT2G27940"
intron_pos 120:0 (1/1)
BEGIN
1 METKHLRKLL QLYQACGGEQ ELTKTVQNVT SSPLTPTPPP QPPSALDSTM ALTIFILLVA
61 LFFMGFFSVY FRHFADSSSS TVDISSMPRT RSSRMSPRRL STSVVVSRPY SFRRGLDSQA
121 VRSLPVYRYT KAAKQRNEDC VICLSDFEEG ETVKVIPHCG HVFHVDCVDT WLSSYVTCPL
181 CRSNQLFSDK DLGMQEPPDQ DSAEEHDTCD GVDTCVRRCS SCSSLGQRTG LERSLSL
//