LOCUS AEC08046.1 442 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana Tetratricopeptide repeat (TPR)-like
superfamily protein protein.
ACCESSION CP002685-3636
PROTEIN_ID AEC08046.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 19698289)
AUTHORS Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D.,
Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V.,
Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L.,
Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam,L.,
Tallon,L.J., Gill,J.E., Adams,M.D., Carrera,A.J., Creasy,T.H.,
Goodman,H.M., Somerville,C.R., Copenhaver,G.P., Preuss,D.,
Nierman,W.C., White,O., Eisen,J.A., Salzberg,S.L., Fraser,C.M. and
Venter,J.C.
TITLE Sequence and analysis of chromosome 2 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 761-768 (1999)
PUBMED 10617197
REFERENCE 2 (bases 1 to 19698289)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 19698289)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="2"
/ecotype="Columbia"
protein /locus_tag="AT2G27800"
/gene_synonym="F15K20.10"
/gene_synonym="F15K20_10"
/inference="Similar to RNA sequence,
EST:INSD:ES100622.1,INSD:EL124138.1,INSD:EL991518.1,
INSD:DR228353.1,INSD:EL992260.1,INSD:EL082916.1,
INSD:EL211015.1,INSD:ES038263.1,INSD:EL232765.1"
/note="Tetratricopeptide repeat (TPR)-like superfamily
protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide
repeat (InterPro:IPR002885); BEST Arabidopsis thaliana
protein match is: pentatricopeptide (PPR)
repeat-containing protein (TAIR:AT5G27300.1); Has 24911
Blast hits to 8623 proteins in 229 species: Archae - 1;
Bacteria - 10; Metazoa - 125; Fungi - 144; Plants - 24131;
Viruses - 0; Other Eukaryotes - 500 (source: NCBI BLink)."
/db_xref="Araport:AT2G27800"
/db_xref="TAIR:AT2G27800"
intron_pos 57:2 (1/2)
intron_pos 85:1 (2/2)
BEGIN
1 MSATRSTFLG SIFRTAKARI LISPIARRSL PSPNFTSSRF HTSSSLRQSR IEGSIPRSFL
61 PSIHVRFHSV SASTWFSSRR TSSQGRLASV SMYIQYSTSV PTRSLRRRIS NRKKSSAKPI
121 LNVSKFHETI SKLPPRFTPE ELADAITLEE DPFLCFHLFN WASQQPRFTH ENCSYHIAIR
181 KLGAAKMYQE MDDIVNQVLS VRHIGNENLY NSIIFYFTKA GKLIRAVNIF RHMVTSKNLE
241 CRPTIRTYHI LFKALLGRGN NSYINHVYME TVRSLFRQMV DSGIEPDVFA LNCLVKGYVL
301 SLHVNDALRI FHQMSVVYDC EPNSFTYDYL IHGLCAQGRT INARELLSEM KGKGFVPNGK
361 SYNSLVNAFA LSGEIDDAVK CLWEMIENGR VVDFISYRTL VDESCRKGKY DEATRLLEML
421 REKQLVDRDS YDKLVNVLHK DL
//