LOCUS AEC08034.1 130 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana 60S acidic ribosomal protein family protein.
ACCESSION CP002685-3616
PROTEIN_ID AEC08034.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 19698289)
AUTHORS Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D.,
Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V.,
Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L.,
Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam,L.,
Tallon,L.J., Gill,J.E., Adams,M.D., Carrera,A.J., Creasy,T.H.,
Goodman,H.M., Somerville,C.R., Copenhaver,G.P., Preuss,D.,
Nierman,W.C., White,O., Eisen,J.A., Salzberg,S.L., Fraser,C.M. and
Venter,J.C.
TITLE Sequence and analysis of chromosome 2 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 761-768 (1999)
PUBMED 10617197
REFERENCE 2 (bases 1 to 19698289)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 19698289)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="2"
/ecotype="Columbia"
protein /locus_tag="AT2G27720"
/gene_synonym="F15K20.18"
/gene_synonym="F15K20_18"
/inference="Similar to RNA sequence,
EST:INSD:BP648826.1,INSD:EL311580.1,INSD:ES152473.1,
INSD:BP649880.1,INSD:ES090660.1,INSD:BP629827.1,
INSD:AV533633.1,INSD:BP653331.1,INSD:EH832866.1,
INSD:BP628304.1,INSD:EL165763.1,INSD:ES010400.1,
INSD:ES207963.1,INSD:Z26542.1,INSD:BP650581.1,
INSD:ES203064.1,INSD:EH826446.1,INSD:EL286626.1,
INSD:ES037366.1,INSD:CF773471.1,INSD:EL072740.1,
INSD:ES163558.1,INSD:EL061192.1,INSD:BP659912.1,
INSD:EH983653.1,INSD:EH871601.1,INSD:EG458435.1,
INSD:ES139541.1,INSD:ES122461.1,INSD:AV534653.1,
INSD:EH838405.1,INSD:ES064369.1,INSD:DR295738.1,
INSD:ES137631.1,INSD:ES200549.1,INSD:ES164614.1,
INSD:ES202063.1,INSD:EL037321.1,INSD:ES011773.1,
INSD:EL981143.1,INSD:EL160990.1,INSD:EL997784.1,
INSD:ES010648.1,INSD:BP644004.1,INSD:EL046143.1,
INSD:EL295942.1,INSD:BP651346.1,INSD:BP660826.1,
INSD:EL981040.1,INSD:EH803181.1,INSD:ES134460.1,
INSD:BP657489.1,INSD:EL973481.1,INSD:EL229019.1,
INSD:ES144886.1,INSD:ES096097.1,INSD:ES008149.1,
INSD:EL978544.1,INSD:EG454945.1,INSD:ES204475.1,
INSD:EL272360.1,INSD:BP666959.1,INSD:ES100557.1,
INSD:ES198239.1,INSD:ES101684.1,INSD:ES057181.1,
INSD:BP644266.1,INSD:EL263603.1,INSD:ES083156.1,
INSD:ES101927.1,INSD:BP641011.1,INSD:BP646476.1,
INSD:BP652886.1,INSD:ES112876.1,INSD:ES064952.1,
INSD:BP638768.1,INSD:ES020454.1,INSD:DR309869.1,
INSD:EL139071.1,INSD:ES152939.1,INSD:ES209413.1,
INSD:ES130453.1,INSD:EH811925.1,INSD:EH946267.1,
INSD:EL052890.1,INSD:EL099998.1,INSD:ES117141.1,
INSD:ES033562.1,INSD:EH941493.1,INSD:ES090055.1,
INSD:BP644088.1,INSD:ES034024.1,INSD:AV534415.1,
INSD:ES079948.1,INSD:ES108794.1,INSD:ES002939.1,
INSD:EL996605.1,INSD:EH807636.1,INSD:EH887332.1,
INSD:ES016989.1,INSD:ES161921.1,INSD:ES172230.1,
INSD:ES073824.1,INSD:AV531840.1,INSD:EL199586.1,
INSD:ES194190.1,INSD:BP651309.1,INSD:EH885408.1,
INSD:BP591028.1,INSD:BP647401.1,INSD:ES192208.1,
INSD:ES103046.1,INSD:EL077384.1,INSD:EL976774.1,
INSD:EL026049.1,INSD:EG454946.1,INSD:EL086633.1,
INSD:ES192342.1,INSD:BP642332.1,INSD:BP639437.1,
INSD:EH892664.1,INSD:ES089872.1,INSD:BP654642.1,
INSD:AV558069.1,INSD:EL994628.1"
/note="60S acidic ribosomal protein family; FUNCTIONS IN:
structural constituent of ribosome; INVOLVED IN:
translational elongation, response to cold; LOCATED IN:
cytosol, cytosolic ribosome, ribosome, nucleus; EXPRESSED
IN: 24 plant structures; EXPRESSED DURING: 13 growth
stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein 60S
(InterPro:IPR001813); BEST Arabidopsis thaliana protein
match is: 60S acidic ribosomal protein family
(TAIR:AT2G27710.4); Has 1841 Blast hits to 1840 proteins
in 328 species: Archae - 0; Bacteria - 0; Metazoa - 762;
Fungi - 418; Plants - 417; Viruses - 0; Other Eukaryotes -
244 (source: NCBI BLink)."
/db_xref="Araport:AT2G27720"
/db_xref="TAIR:AT2G27720"
intron_pos 30:1 (1/3)
intron_pos 45:1 (2/3)
intron_pos 123:0 (3/3)
BEGIN
1 MKVVAAFLLA VLSGKASPTT GDIKDILGSG IMVLVLDCVV IGDCFGAETE DSQIELLLKE
61 VKGKDLAELI AAGREKLASV PSGGGGGVAV ASATSGGGGG GGAPAAESKK EEKKEEKEES
121 DDDMGFSLFE
//