LOCUS AEC08033.1 115 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana 60S acidic ribosomal protein family protein.
ACCESSION CP002685-3618
PROTEIN_ID AEC08033.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 19698289)
AUTHORS Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D.,
Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V.,
Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L.,
Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam,L.,
Tallon,L.J., Gill,J.E., Adams,M.D., Carrera,A.J., Creasy,T.H.,
Goodman,H.M., Somerville,C.R., Copenhaver,G.P., Preuss,D.,
Nierman,W.C., White,O., Eisen,J.A., Salzberg,S.L., Fraser,C.M. and
Venter,J.C.
TITLE Sequence and analysis of chromosome 2 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 761-768 (1999)
PUBMED 10617197
REFERENCE 2 (bases 1 to 19698289)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 19698289)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="2"
/ecotype="Columbia"
protein /locus_tag="AT2G27720"
/gene_synonym="F15K20.18"
/gene_synonym="F15K20_18"
/inference="Similar to RNA sequence,
EST:INSD:BP648826.1,INSD:EL311580.1,INSD:DR309854.1,
INSD:ES090660.1,INSD:AV532957.1,INSD:BP629827.1,
INSD:BP802727.1,INSD:EG500170.1,INSD:AV533633.1,
INSD:EH832866.1,INSD:BP653331.1,INSD:BP628304.1,
INSD:DR309848.1,INSD:EL165763.1,INSD:ES010400.1,
INSD:BP827767.1,INSD:ES207963.1,INSD:Z26542.1,
INSD:EH826446.1,INSD:DR309808.1,INSD:EL286626.1,
INSD:CF773471.1,INSD:DR309794.1,INSD:EL072740.1,
INSD:EL061192.1,INSD:BP822074.1,INSD:BP659912.1,
INSD:EG458435.1,INSD:DR309787.1,INSD:DR309823.1,
INSD:ES139541.1,INSD:ES122461.1,INSD:EH838405.1,
INSD:AV532842.1,INSD:ES137631.1,INSD:BP578162.1,
INSD:DR309842.1,INSD:EG452239.1,INSD:N37160.1,
INSD:DR309811.1,INSD:ES202063.1,INSD:DR309866.1,
INSD:BP833734.1,INSD:DR309786.1,INSD:EL037321.1,
INSD:BP822813.1,INSD:EL997784.1,INSD:DR309827.1,
INSD:BP644004.1,INSD:DR309841.1,INSD:CB264543.1,
INSD:EL046143.1,INSD:AV534593.1,INSD:BP790203.1,
INSD:BP861993.1,INSD:DR309845.1,INSD:BP660826.1,
INSD:DR309790.1,INSD:BP658536.1,INSD:EH803181.1,
INSD:BP644509.1,INSD:ES211432.1,INSD:AV532431.1,
INSD:BP581265.1,INSD:DR309813.1,INSD:EL229019.1,
INSD:DR309837.1,INSD:ES144886.1,INSD:BP595189.1,
INSD:DR309875.1,INSD:ES202361.1,INSD:DR309861.1,
INSD:AV538838.1,INSD:ES204475.1,INSD:DR309807.1,
INSD:EL272360.1,INSD:BP656215.1,INSD:BP806747.1,
INSD:DR309835.1,INSD:DR309856.1,INSD:BP834318.1,
INSD:BP822270.1,INSD:ES198239.1,INSD:ES101684.1,
INSD:BP838301.1,INSD:DR309879.1,INSD:DR309862.1,
INSD:EL263603.1,INSD:ES101927.1,INSD:DR309836.1,
INSD:DR309812.1,INSD:BP652886.1,INSD:BP646476.1,
INSD:BP850643.1,INSD:AV555803.1,INSD:DR309796.1,
INSD:DR309825.1,INSD:BP814327.1,INSD:ES020454.1,
INSD:DR309822.1,INSD:BP585522.1,INSD:CK118636.1,
INSD:ES130453.1,INSD:EH811925.1,INSD:EL099998.1,
INSD:BP647631.1,INSD:BP595766.1,INSD:DR309832.1,
INSD:BP644088.1,INSD:ES034024.1,INSD:DR309800.1,
INSD:EL996605.1,INSD:EH807636.1,INSD:ES161921.1,
INSD:BP643375.1,INSD:DR309880.1,INSD:DR309830.1,
INSD:DR309799.1,INSD:AV532895.1,INSD:BP591028.1,
INSD:BP651309.1,INSD:BP585513.1,INSD:DR309859.1,
INSD:CF652918.1,INSD:BP647401.1,INSD:EL077384.1,
INSD:DR309791.1,INSD:DR309860.1,INSD:DR309872.1,
INSD:EG454946.1,INSD:DR309821.1,INSD:DR309871.1,
INSD:BP642332.1,INSD:BP639437.1,INSD:EH892664.1,
INSD:AV790488.1,INSD:ES181457.1,INSD:BP580282.1,
INSD:BP668485.1,INSD:ES097516.1,INSD:BP654642.1,
INSD:DR309810.1,INSD:DR309831.1,INSD:DR309834.1,
INSD:BP862444.1,INSD:BP569151.1,INSD:DR309838.1,
INSD:ES152473.1,INSD:BP593130.1,INSD:BP649880.1,
INSD:BP596726.1,INSD:DR289347.1,INSD:DR309853.1,
INSD:DR309888.1,INSD:BP835408.1,INSD:DR309809.1,
INSD:DR309881.1,INSD:DR309847.1,INSD:ES203064.1,
INSD:AV785182.1,INSD:BP650581.1,INSD:DR309803.1,
INSD:DR309876.1,INSD:BP811878.1,INSD:ES037366.1,
INSD:AV535542.1,INSD:ES163558.1,INSD:BP803646.1,
INSD:EH983653.1,INSD:BP838244.1,INSD:EH871601.1,
INSD:ES201027.1,INSD:EH851764.1,INSD:BP641335.1,
INSD:BE037625.1,INSD:DR309858.1,INSD:AV534653.1,
INSD:DR309817.1,INSD:ES064369.1,INSD:AV532713.1,
INSD:DR295738.1,INSD:DR309873.1,INSD:ES200549.1,
INSD:DR309843.1,INSD:DR309878.1,INSD:ES164614.1,
INSD:DR309882.1,INSD:DR309792.1,INSD:BP802426.1,
INSD:ES011773.1,INSD:EL981143.1,INSD:EL160990.1,
INSD:DR309806.1,INSD:ES010648.1,INSD:ES208474.1,
INSD:BP824691.1,INSD:EL295942.1,INSD:EG500169.1,
INSD:BP840097.1,INSD:AV824047.1,INSD:EG428860.1,
INSD:BP651346.1,INSD:EL981040.1,INSD:BP827385.1,
INSD:BP812015.1,INSD:BP642407.1,INSD:DR309801.1,
INSD:ES134460.1,INSD:BP827229.2,INSD:DR309887.1,
INSD:DR309846.1,INSD:AV533944.1,INSD:BP657489.1,
INSD:EL973481.1,INSD:DR309798.1,INSD:EG505611.1,
INSD:ES096097.1,INSD:DR309863.1,INSD:DR309857.1,
INSD:DR309852.1,INSD:DR309804.1,INSD:ES008149.1,
INSD:EL978544.1,INSD:EG454945.1,INSD:DR309820.1,
INSD:BP643290.1,INSD:DR309886.1,INSD:BP666959.1,
INSD:DR309877.1,INSD:DR309828.1,INSD:DR309885.1,
INSD:BP578522.1,INSD:BP821884.1,INSD:ES100557.1,
INSD:DR309816.1,INSD:BP565830.1,INSD:BP840368.1,
INSD:ES057181.1,INSD:EG428859.1,INSD:BP644266.1,
INSD:EL062549.1,INSD:ES083156.1,INSD:BP641011.1,
INSD:BP829327.1,INSD:ES112876.1,INSD:BP589457.1,
INSD:DR309833.1,INSD:BP831746.1,INSD:DR362582.1,
INSD:DR309814.1,INSD:DR309883.1,INSD:ES064952.1,
INSD:BP638768.1,INSD:DR309869.1,INSD:EL139071.1,
INSD:ES152939.1,INSD:EG505612.1,INSD:DR309870.1,
INSD:DR309844.1,INSD:ES209413.1,INSD:BP644877.1,
INSD:BP813203.1,INSD:BP830898.1,INSD:DR309851.1,
INSD:DR309829.1,INSD:BP869022.1,INSD:EH946267.1,
INSD:BP856040.1,INSD:EL052890.1,INSD:AV535437.1,
INSD:EL080307.1,INSD:ES117141.1,INSD:BP837833.1,
INSD:ES033562.1,INSD:EH929056.1,INSD:EH941493.1,
INSD:ES090055.1,INSD:BP829237.1,INSD:DR309824.1,
INSD:DR309850.1,INSD:BP825806.1,INSD:DR309840.1,
INSD:AV534415.1,INSD:DR309795.1,INSD:BP565332.1,
INSD:AV550063.1,INSD:ES079948.1,INSD:DR309789.1,
INSD:ES108794.1,INSD:BU635171.1,INSD:ES002939.1,
INSD:EH887332.1,INSD:ES016989.1,INSD:ES172230.1,
INSD:EG452238.1,INSD:ES073824.1,INSD:DR309867.1,
INSD:AV531840.1,INSD:DR309849.1,INSD:BP840169.1,
INSD:BP819036.1,INSD:BP595648.1,INSD:ES194190.1,
INSD:EL199586.1,INSD:DR309793.1,INSD:DR309855.1,
INSD:EH885408.1,INSD:AV530702.1,INSD:DR309797.1,
INSD:DR309865.1,INSD:ES192208.1,INSD:DR309802.1,
INSD:DR309874.1,INSD:ES103046.1,INSD:EL976774.1,
INSD:BP856453.1,INSD:DR309818.1,INSD:EL026049.1,
INSD:DR309839.1,INSD:EL086633.1,INSD:AV521389.1,
INSD:ES192342.1,INSD:AV534958.1,INSD:DR309826.1,
INSD:DR309884.1,INSD:ES089872.1,INSD:AV558069.1,
INSD:DR373131.1,INSD:DR309805.1,INSD:BP641638.1,
INSD:EL994628.1"
/inference="similar to RNA sequence,
mRNA:INSD:BX822066.1,INSD:BX821300.1,INSD:AY093717.1,
INSD:AY085945.1,INSD:AF410295.1"
/note="60S acidic ribosomal protein family; FUNCTIONS IN:
structural constituent of ribosome; INVOLVED IN:
translational elongation, response to cold; LOCATED IN:
cytosol, cytosolic ribosome, ribosome, nucleus, membrane;
EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 14
growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal
protein 60S (InterPro:IPR001813); BEST Arabidopsis
thaliana protein match is: 60S acidic ribosomal protein
family (TAIR:AT2G27710.4); Has 1976 Blast hits to 1975
proteins in 364 species: Archae - 32; Bacteria - 0;
Metazoa - 785; Fungi - 446; Plants - 440; Viruses - 0;
Other Eukaryotes - 273 (source: NCBI BLink)."
/db_xref="Araport:AT2G27720"
/db_xref="TAIR:AT2G27720"
intron_pos 30:1 (1/2)
intron_pos 108:0 (2/2)
BEGIN
1 MKVVAAFLLA VLSGKASPTT GDIKDILGSV GAETEDSQIE LLLKEVKGKD LAELIAAGRE
61 KLASVPSGGG GGVAVASATS GGGGGGGAPA AESKKEEKKE EKEESDDDMG FSLFE
//