LOCUS AEC08030.1 115 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana 60S acidic ribosomal protein family protein.
ACCESSION CP002685-3613
PROTEIN_ID AEC08030.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 19698289)
AUTHORS Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D.,
Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V.,
Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L.,
Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam,L.,
Tallon,L.J., Gill,J.E., Adams,M.D., Carrera,A.J., Creasy,T.H.,
Goodman,H.M., Somerville,C.R., Copenhaver,G.P., Preuss,D.,
Nierman,W.C., White,O., Eisen,J.A., Salzberg,S.L., Fraser,C.M. and
Venter,J.C.
TITLE Sequence and analysis of chromosome 2 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 761-768 (1999)
PUBMED 10617197
REFERENCE 2 (bases 1 to 19698289)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 19698289)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="2"
/ecotype="Columbia"
protein /locus_tag="AT2G27710"
/gene_synonym="F15K20.19"
/gene_synonym="F15K20_19"
/inference="Similar to RNA sequence,
EST:INSD:ES014085.1,INSD:EH821732.1,INSD:EH906119.1,
INSD:BP650257.1,INSD:EG436074.1,INSD:EL999805.1,
INSD:EG495545.1,INSD:ES092763.1,INSD:ES033578.1,
INSD:BP644575.1,INSD:EL999552.1,INSD:ES107203.1,
INSD:AV535199.1,INSD:EG436063.1,INSD:EH864757.1,
INSD:ES206646.1,INSD:EL969830.1,INSD:ES158644.1,
INSD:ES033007.1,INSD:ES091946.1,INSD:EL004384.1,
INSD:ES208301.1,INSD:ES141560.1,INSD:ES092765.1,
INSD:ES025370.1,INSD:CD531031.1,INSD:EL086229.1,
INSD:ES191442.1,INSD:ES188296.1,INSD:AV812250.1,
INSD:AV542661.1,INSD:EH879466.1,INSD:ES154654.1,
INSD:EL253866.1,INSD:EG458427.1,INSD:ES104224.1,
INSD:ES142561.1,INSD:EG455770.1,INSD:BP639836.1,
INSD:EL125871.1,INSD:EH986711.1,INSD:EH835581.1,
INSD:EL035032.1,INSD:AA597340.1,INSD:ES014459.1,
INSD:ES017462.1,INSD:CB261471.1,INSD:EG500192.1,
INSD:BP814407.1,INSD:DR381507.1,INSD:CK118656.1,
INSD:EL155179.1,INSD:BP825607.1,INSD:AV532013.1,
INSD:ES138746.1,INSD:BP590750.1,INSD:EL109153.1,
INSD:ES069041.1,INSD:BP573934.1,INSD:ES045390.1,
INSD:AV789542.1,INSD:BP579466.1,INSD:EL201237.1,
INSD:EG505080.1,INSD:BP655056.1,INSD:ES032636.1,
INSD:ES009814.1,INSD:ES097561.1,INSD:EG499657.1,
INSD:AV802403.1,INSD:ES186831.1,INSD:ES172793.1,
INSD:BP623248.1,INSD:EL329412.1,INSD:ES144964.1,
INSD:AV549074.1,INSD:ES025146.1,INSD:EL178890.1,
INSD:EG458433.1,INSD:ES111674.1,INSD:EL303626.1,
INSD:AV554028.1,INSD:EH981082.1,INSD:BP634827.1,
INSD:AV535089.1,INSD:BP640608.1,INSD:EG515654.1,
INSD:EL063569.1,INSD:DR223059.1,INSD:ES128580.1,
INSD:ES140533.1,INSD:AV537326.1,INSD:BP571192.1,
INSD:AV533191.1,INSD:EH917163.1,INSD:ES073905.1,
INSD:EH859527.1,INSD:ES163881.1,INSD:ES104948.1,
INSD:EL267755.1,INSD:EH936969.1,INSD:BP615054.1,
INSD:BP569336.1,INSD:EL150936.1,INSD:EL996551.1,
INSD:BP637969.1,INSD:BP777714.1,INSD:BP643430.1,
INSD:ES140571.1,INSD:EL163199.1,INSD:BP589456.1,
INSD:EH903334.1,INSD:ES139717.1,INSD:ES088302.1,
INSD:EG505154.1,INSD:ES075423.1,INSD:AV533529.1,
INSD:DR382644.1,INSD:EL184762.1,INSD:EG428827.1,
INSD:ES037481.1,INSD:BP619035.1,INSD:ES068854.1,
INSD:BP639308.1,INSD:AV810934.1,INSD:EH891313.1,
INSD:CK119969.1,INSD:ES090325.1,INSD:AV796516.1,
INSD:EL288696.1,INSD:ES086180.1,INSD:BP636146.1,
INSD:ES099425.1,INSD:BP644153.1,INSD:EL111137.1,
INSD:EG429297.1,INSD:Z26464.1,INSD:BP569494.1,
INSD:ES116886.1,INSD:EH965098.1,INSD:AV555146.1,
INSD:BP589659.1,INSD:ES024690.1,INSD:EG515653.1,
INSD:ES032501.1,INSD:BP592274.1,INSD:EL277517.1,
INSD:BP574036.1,INSD:EG500193.1,INSD:EH825534.1,
INSD:AA597959.1,INSD:BP598042.1,INSD:ES061296.1,
INSD:ES157973.1,INSD:EL335846.1,INSD:ES155208.1,
INSD:EG458426.1,INSD:EG455769.1,INSD:ES014090.1,
INSD:ES132357.1,INSD:AV531162.1,INSD:ES019188.1,
INSD:EL054905.1,INSD:BP648383.1,INSD:EG458431.1,
INSD:ES035784.1,INSD:BP623354.1,INSD:BP648398.1,
INSD:EH819739.1,INSD:BP627311.1,INSD:AV531176.1,
INSD:ES078919.1,INSD:EL970120.1,INSD:ES063573.1,
INSD:ES151848.1,INSD:EG499658.1,INSD:ES080924.1,
INSD:EL330664.1,INSD:EL000347.1,INSD:ES138974.1,
INSD:ES056393.1,INSD:ES044325.1,INSD:CK119200.1,
INSD:ES049844.1,INSD:EH907411.1,INSD:EG458425.1,
INSD:EH863419.1,INSD:AV813249.1,INSD:ES200022.1,
INSD:ES213102.1,INSD:ES025078.1,INSD:ES145462.1,
INSD:ES008511.1,INSD:AV531010.1,INSD:ES170219.1,
INSD:ES101711.1,INSD:EH899133.1,INSD:ES113457.1,
INSD:AA394834.1,INSD:EL040686.1,INSD:ES009515.1,
INSD:EL311903.1,INSD:EG458439.1,INSD:BP652362.1,
INSD:EL308025.1,INSD:ES136349.1,INSD:EH923704.1,
INSD:EH835706.1,INSD:EL107084.1,INSD:EL979818.1,
INSD:DR378676.1,INSD:BP656305.1,INSD:ES116965.1,
INSD:ES043982.1,INSD:EH973737.1,INSD:ES202818.1,
INSD:BP652537.1,INSD:EL216945.1,INSD:ES080935.1,
INSD:EH894366.1"
/inference="similar to RNA sequence,
mRNA:INSD:AJ276758.1,INSD:BT006518.1,INSD:AF428429.1"
/note="60S acidic ribosomal protein family; FUNCTIONS IN:
structural constituent of ribosome; INVOLVED IN:
translational elongation, response to cold; LOCATED IN: in
8 components; EXPRESSED IN: 24 plant structures; EXPRESSED
DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s:
Ribosomal protein 60S (InterPro:IPR001813); BEST
Arabidopsis thaliana protein match is: 60S acidic
ribosomal protein family (TAIR:AT2G27720.1); Has 1875
Blast hits to 1874 proteins in 360 species: Archae - 31;
Bacteria - 1; Metazoa - 679; Fungi - 442; Plants - 437;
Viruses - 0; Other Eukaryotes - 285 (source: NCBI BLink)."
/db_xref="Araport:AT2G27710"
/db_xref="TAIR:AT2G27710"
intron_pos 30:1 (1/2)
intron_pos 108:0 (2/2)
BEGIN
1 MKVVAAYLLA VLSGKASPTS ADIKTILGSV GAETEDSQIE LLLKEVKGKD LAELIAAGRE
61 KLASVPSGGG GGVAVASATS GGGGGGGASA AESKKEEKKE EKEESDDDMG FSLFE
//