LOCUS AEC08022.1 1106 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana Ubiquitin carboxyl-terminal hydrolase-
related protein protein.
ACCESSION CP002685-3605
PROTEIN_ID AEC08022.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 19698289)
AUTHORS Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D.,
Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V.,
Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L.,
Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam,L.,
Tallon,L.J., Gill,J.E., Adams,M.D., Carrera,A.J., Creasy,T.H.,
Goodman,H.M., Somerville,C.R., Copenhaver,G.P., Preuss,D.,
Nierman,W.C., White,O., Eisen,J.A., Salzberg,S.L., Fraser,C.M. and
Venter,J.C.
TITLE Sequence and analysis of chromosome 2 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 761-768 (1999)
PUBMED 10617197
REFERENCE 2 (bases 1 to 19698289)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 19698289)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="2"
/ecotype="Columbia"
protein /locus_tag="AT2G27650"
/gene_synonym="F15K20.25"
/gene_synonym="F15K20_25"
/inference="Similar to RNA sequence,
EST:INSD:EG434991.1,INSD:EG434737.1,INSD:EG429964.1,
INSD:EG434722.1,INSD:EG434937.1,INSD:EG434972.1,
INSD:EG434945.1,INSD:EG434727.1,INSD:EG434725.1,
INSD:EG434724.1,INSD:EG434732.1,INSD:EG429966.1,
INSD:EG434721.1,INSD:EG434956.1,INSD:EG429957.1,
INSD:EG434712.1,INSD:EG434970.1,INSD:EG434735.1,
INSD:EG434710.1,INSD:EG434723.1,INSD:EG434939.1,
INSD:EG434726.1,INSD:EG434958.1,INSD:EG434730.1,
INSD:EG434944.1,INSD:EG434942.1,INSD:EG434741.1,
INSD:EG434720.1,INSD:EG434951.1,INSD:EG434948.1,
INSD:EG434995.1,INSD:EG434728.1,INSD:EG434993.1,
INSD:EG429970.1,INSD:EG429959.1,INSD:EG429968.1,
INSD:EG434968.1,INSD:EG434947.1,INSD:EG429961.1,
INSD:EG434954.1"
/inference="similar to RNA sequence,
mRNA:INSD:AY219093.1,INSD:AY464608.1,INSD:AY464609.1,
INSD:DQ069795.1"
/note="Ubiquitin carboxyl-terminal hydrolase-related
protein; FUNCTIONS IN: ubiquitin thiolesterase activity,
zinc ion binding; INVOLVED IN: ubiquitin-dependent protein
catabolic process; LOCATED IN: intracellular; EXPRESSED
IN: 10 plant structures; EXPRESSED DURING: 6 growth
stages; CONTAINS InterPro DOMAIN/s: Protein of unknown
function DUF627 (InterPro:IPR006866), Peptidase C19,
ubiquitin carboxyl-terminal hydrolase 2
(InterPro:IPR001394), Zinc finger, C2H2-type
(InterPro:IPR007087), Protein of unknown function DUF629
(InterPro:IPR006865); BEST Arabidopsis thaliana protein
match is: Ubiquitin carboxyl-terminal hydrolase-related
protein (TAIR:AT2G27630.1); Has 35333 Blast hits to 34131
proteins in 2444 species: Archae - 798; Bacteria - 22429;
Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0;
Other Eukaryotes - 9610 (source: NCBI BLink)."
/db_xref="Araport:AT2G27650"
/db_xref="TAIR:AT2G27650"
intron_pos 655:0 (1/11)
intron_pos 698:0 (2/11)
intron_pos 742:0 (3/11)
intron_pos 757:2 (4/11)
intron_pos 783:1 (5/11)
intron_pos 818:0 (6/11)
intron_pos 884:0 (7/11)
intron_pos 953:0 (8/11)
intron_pos 1002:1 (9/11)
intron_pos 1046:0 (10/11)
intron_pos 1076:0 (11/11)
BEGIN
1 MKRTTFLEDA ERVKLYNDAR ALFANGDHIK ALEIIEDIIL VHKEDEKSWI LHSEQGEMFN
61 DLAGKAENPY VDFTYMLGSV GCYSKDVLLS RPWAHGLHYL AQESGSVMYY KKCVNVAKQG
121 LSVTFPDASE SFAQLLLENL KNDMKENLET LIKDAESNIA DSKTVELKGL LQQDFEPEVL
181 ESKKRPELVK NEFKGLRSFW LGLDVNVKRD FMKVSIAKLI GFVKGVHHRP GRDALKQILD
241 SAKEDRKWTF WMCRTKCSKK FSSAEECKNH LEKEHAADYK PFSEMDMAKR IGKDWTRKIS
301 LGSWEPVDIA AAVEMIKNRL PEVKAFSYKN GWSKEWPLAE DEERSKLLKE IKFFLVMFCD
361 LKILPCSIRD WMKRYSVTHL KNLNVSEQSL VDSHLVDTPQ SICFLECHKL SYILNLLKRI
421 KCERDDGTNL VRRAVDSILD STRSKEKIDF DPQFSFLLLD RRLLKSNNGP FVDEGEINVF
481 DPNVHYAKAH AQGDDIVSWL TDYNSVEKTF PRPIREHNLD IWVAVLRAVQ FTCRTFGTKY
541 AKKVQLFDYL AAIVAAEKLC KSEYERRRKL KEDQWNSYAS LLCDKCEECF SRKNFLKRKL
601 FLSVVRDILE EASDLTFDLP DIEGCMNLIR EHKSLNDDIV LKSLICLNSV VIFKILLIDS
661 KILLVDNSRI SLLNNLTRLS LFDNRTYILQ LLKPFLLNEI VNMESKAKSD AAVADLLLEE
721 EKKNPKPSPI QSKKKKNTSK KRNSTSMSSP LSKPGEHLEP ETTSPTVEED SMELGDTVNQ
781 EEVMKNMLGE DSQSEHLESA LSEASARYNS ALDMTLKALL NIKILKEDLM HNMQPLQHHL
841 EDQVPSVLQN FFTAFVSEEI KTEGVYSYLL SDLLALLEEV LSMSSGAAEV LVAILEFWHC
901 WKNAERESLV TRLFTLEEKE RMSCRKCRKK PNYPEQSSYG IVMAADSIRD LKCALGNIEF
961 VDILKVIRMD YTMLCDIKNG GCGIANFIHH IISKCPPIFT IVLEWEKSET EKEISETTKA
1021 FEWEIDISRL YAGLEPKTNY RLASMVGCDE KQEHICIAYE KNRWVNLRRD ALAGEDVGNW
1081 KSVVRFCGER KVRPEILFYE VVRSMA
//