LOCUS AEC08021.1 1122 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana Ubiquitin carboxyl-terminal hydrolase-
related protein protein.
ACCESSION CP002685-3604
PROTEIN_ID AEC08021.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 19698289)
AUTHORS Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D.,
Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V.,
Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L.,
Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam,L.,
Tallon,L.J., Gill,J.E., Adams,M.D., Carrera,A.J., Creasy,T.H.,
Goodman,H.M., Somerville,C.R., Copenhaver,G.P., Preuss,D.,
Nierman,W.C., White,O., Eisen,J.A., Salzberg,S.L., Fraser,C.M. and
Venter,J.C.
TITLE Sequence and analysis of chromosome 2 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 761-768 (1999)
PUBMED 10617197
REFERENCE 2 (bases 1 to 19698289)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 19698289)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="2"
/ecotype="Columbia"
protein /locus_tag="AT2G27630"
/gene_synonym="F15K20.27"
/gene_synonym="F15K20_27"
/inference="Similar to RNA sequence,
EST:INSD:EG430089.1,INSD:EG430086.1,INSD:EG434666.1,
INSD:EG434674.1,INSD:EG434668.1,INSD:EG434671.1,
INSD:EG430091.1,INSD:EG430087.1,INSD:EG429726.1,
INSD:EG435493.1,INSD:EG435494.1,INSD:EG434672.1,
INSD:EG429727.1,INSD:EG434661.1,INSD:EG434667.1,
INSD:EG434676.1,INSD:EG434664.1,INSD:EG435501.1,
INSD:EG434678.1,INSD:EG434669.1,INSD:EG434675.1,
INSD:EG435495.1,INSD:EG434659.1,INSD:EG434663.1,
INSD:EG429732.1,INSD:EG429731.1,INSD:EG434658.1,
INSD:EG434665.1"
/inference="similar to RNA sequence,
mRNA:INSD:AY464625.1,INSD:AY464638.1"
/note="Ubiquitin carboxyl-terminal hydrolase-related
protein; FUNCTIONS IN: ubiquitin thiolesterase activity,
zinc ion binding; INVOLVED IN: ubiquitin-dependent protein
catabolic process; LOCATED IN: intracellular; CONTAINS
InterPro DOMAIN/s: Protein of unknown function DUF627
(InterPro:IPR006866), Peptidase C19, ubiquitin
carboxyl-terminal hydrolase 2 (InterPro:IPR001394), Zinc
finger, C2H2-type (InterPro:IPR007087), Protein of unknown
function DUF629 (InterPro:IPR006865); BEST Arabidopsis
thaliana protein match is: Ubiquitin carboxyl-terminal
hydrolase-related protein (TAIR:AT2G27650.1); Has 35333
Blast hits to 34131 proteins in 2444 species: Archae -
798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants
- 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI
BLink)."
/db_xref="Araport:AT2G27630"
/db_xref="TAIR:AT2G27630"
intron_pos 651:0 (1/11)
intron_pos 694:0 (2/11)
intron_pos 735:0 (3/11)
intron_pos 750:2 (4/11)
intron_pos 798:1 (5/11)
intron_pos 833:0 (6/11)
intron_pos 896:0 (7/11)
intron_pos 965:0 (8/11)
intron_pos 1014:1 (9/11)
intron_pos 1058:0 (10/11)
intron_pos 1089:0 (11/11)
BEGIN
1 MESTTFLKDA VSVKLHAKAK ELFANGDHIK ALEIIEDMIC VNKEDKNIWF LYSEQGYMFT
61 KLSEKAENLD VDFTFKLGAV GCSSEHEKLL SLCAHGFHTL AHHIGSVMYY KKCLKKAKQC
121 LSVSNQSEDS DSSVAQMSLH KNKTNKDLET LIKNAETAIA LSKIGKLKGL LEEDDEPEVL
181 ESKSSSEPVK NEIKGLRSFW LGLNVKVKRD FMKVSIAKLT SFVQRVYDRP RQNALEQILV
241 SAREDRKWTF WMCQNCSEKF SSAEECKKHL EQEHAAGFKP SKEMDMKRIG KDWARKISVG
301 GWEPVDTGAA VEMIKNRLAD VKAFSYKNGW SKEWPLASDD ERGKLLKEIK NLLVMFRDLK
361 ILPCSVRDCV MQYPLRYFGE LEVSKQSLVD SHLVETPQSI CFLDCHELNK ILNFLKRIKS
421 ERDDGIDVVS RAVDSILSST RVKEKVDFDP QFSLLLLDRR LLKSNNAPIN DEGTINVFDP
481 NVYPKAPAQG DDIISWLTDY NSVEKTFPIP IRVHNLDIWV AVLRAVQFTC RTLETKYAKK
541 VQVFNYSVAL TAVEDLCISE DERRRNLQED QWNSYASLLS DRCEEGVLRN SLTTKLFVCA
601 VRDVLEGASD LTFEFPDFEE CMNLIRGRKS LSDDIVLKSI AFLKILAHTK VMLIDSKILL
661 IDKSRISLLN DLTRLSVFDN RTYLLELLKN FLLNEIIIMA SKAKLDAAAA AEADLLLEEE
721 KKSQSKKRKN TSKKKTSTSI SSPLSKTVEH KSSDILEPES TSPSLGKVEE DSMEPDATLS
781 SERGRLEISP NTVNQEEVTQ NIPVEDSQSE HLESALRDAA TRYNSALDMT LKALLNIQIL
841 KEDLMQPFQD HPEEHVPPAL RNFFTAIVSD GINVEGVYSC LLRDLLASLE EVISMSSDAA
901 EVLVTILESW HCWKNAERES LVTRLFTLEE NERMSCRKCR KKPNYPEQSS YGIVMAADSI
961 RDLKCALGNI EFVDILKVIR MDYTMLCDVK TGGCGITNLV HHILSKCPPV FIIVLEWEKS
1021 ETEKEISETT KALYWEIDIS RMYEGLKPNT KYRLVSMVGC GVEEEEHICI AYENNRWFNL
1081 RHDALTREDV GNWKSVVGFC EERKVRPEIL FYEATGSIDS LN
//