LOCUS AEC08020.1 868 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana Tetratricopeptide repeat (TPR)-like
superfamily protein protein.
ACCESSION CP002685-3603
PROTEIN_ID AEC08020.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 19698289)
AUTHORS Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D.,
Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V.,
Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L.,
Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam,L.,
Tallon,L.J., Gill,J.E., Adams,M.D., Carrera,A.J., Creasy,T.H.,
Goodman,H.M., Somerville,C.R., Copenhaver,G.P., Preuss,D.,
Nierman,W.C., White,O., Eisen,J.A., Salzberg,S.L., Fraser,C.M. and
Venter,J.C.
TITLE Sequence and analysis of chromosome 2 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 761-768 (1999)
PUBMED 10617197
REFERENCE 2 (bases 1 to 19698289)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 19698289)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="2"
/ecotype="Columbia"
protein /locus_tag="AT2G27610"
/gene_synonym="F15K20.29"
/gene_synonym="F15K20_29"
/inference="Similar to RNA sequence,
EST:INSD:AV555712.1,INSD:BP789131.1,INSD:AV790795.1,
INSD:AV797203.1,INSD:BP671214.1,INSD:EG445840.1,
INSD:AV815614.1,INSD:BP573825.1,INSD:AV819450.1,
INSD:DR370607.1,INSD:BP667789.1,INSD:AV797765.1,
INSD:BP791140.1,INSD:BP581136.1,INSD:EL031051.1,
INSD:EL281519.1,INSD:BP626644.1,INSD:BP610011.1,
INSD:AV819848.1,INSD:BP625056.1"
/note="Tetratricopeptide repeat (TPR)-like superfamily
protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide
repeat (InterPro:IPR002885); BEST Arabidopsis thaliana
protein match is: Pentatricopeptide repeat (PPR)
superfamily protein (TAIR:AT4G13650.1); Has 54594 Blast
hits to 14874 proteins in 305 species: Archae - 2;
Bacteria - 30; Metazoa - 158; Fungi - 263; Plants - 53396;
Viruses - 0; Other Eukaryotes - 745 (source: NCBI BLink)."
/db_xref="Araport:AT2G27610"
/db_xref="TAIR:AT2G27610"
BEGIN
1 MRFTTTIWRP PSLENFKPKF RIYANGVAQV RIYCFGTVSS SRLYNAHNLF DKSPGRDRES
61 YISLLFGFSR DGRTQEAKRL FLNIHRLGME MDCSIFSSVL KVSATLCDEL FGRQLHCQCI
121 KFGFLDDVSV GTSLVDTYMK GSNFKDGRKV FDEMKERNVV TWTTLISGYA RNSMNDEVLT
181 LFMRMQNEGT QPNSFTFAAA LGVLAEEGVG GRGLQVHTVV VKNGLDKTIP VSNSLINLYL
241 KCGNVRKARI LFDKTEVKSV VTWNSMISGY AANGLDLEAL GMFYSMRLNY VRLSESSFAS
301 VIKLCANLKE LRFTEQLHCS VVKYGFLFDQ NIRTALMVAY SKCTAMLDAL RLFKEIGCVG
361 NVVSWTAMIS GFLQNDGKEE AVDLFSEMKR KGVRPNEFTY SVILTALPVI SPSEVHAQVV
421 KTNYERSSTV GTALLDAYVK LGKVEEAAKV FSGIDDKDIV AWSAMLAGYA QTGETEAAIK
481 MFGELTKGGI KPNEFTFSSI LNVCAATNAS MGQGKQFHGF AIKSRLDSSL CVSSALLTMY
541 AKKGNIESAE EVFKRQREKD LVSWNSMISG YAQHGQAMKA LDVFKEMKKR KVKMDGVTFI
601 GVFAACTHAG LVEEGEKYFD IMVRDCKIAP TKEHNSCMVD LYSRAGQLEK AMKVIENMPN
661 PAGSTIWRTI LAACRVHKKT ELGRLAAEKI IAMKPEDSAA YVLLSNMYAE SGDWQERAKV
721 RKLMNERNVK KEPGYSWIEV KNKTYSFLAG DRSHPLKDQI YMKLEDLSTR LKDLGYEPDT
781 SYVLQDIDDE HKEAVLAQHS ERLAIAFGLI ATPKGSPLLI IKNLRVCGDC HLVIKLIAKI
841 EEREIVVRDS NRFHHFSSDG VCSCGDFW
//