LOCUS AEC08004.1 392 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana Glycosyl hydrolase superfamily protein
protein.
ACCESSION CP002685-3586
PROTEIN_ID AEC08004.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 19698289)
AUTHORS Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D.,
Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V.,
Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L.,
Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam,L.,
Tallon,L.J., Gill,J.E., Adams,M.D., Carrera,A.J., Creasy,T.H.,
Goodman,H.M., Somerville,C.R., Copenhaver,G.P., Preuss,D.,
Nierman,W.C., White,O., Eisen,J.A., Salzberg,S.L., Fraser,C.M. and
Venter,J.C.
TITLE Sequence and analysis of chromosome 2 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 761-768 (1999)
PUBMED 10617197
REFERENCE 2 (bases 1 to 19698289)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 19698289)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="2"
/ecotype="Columbia"
protein /locus_tag="AT2G27500"
/gene_synonym="F10A12.18"
/gene_synonym="F10A12_18"
/inference="Similar to RNA sequence,
EST:INSD:AV795160.1,INSD:BU636539.1,INSD:EH808477.1,
INSD:EH841783.1,INSD:AV831446.1,INSD:EG525768.1,
INSD:EG514593.1,INSD:BP582815.1,INSD:AV552643.1,
INSD:AI996634.1,INSD:EH917188.1,INSD:AV829101.1,
INSD:ES029554.1,INSD:DR313922.1,INSD:AV816073.1,
INSD:AV531542.1,INSD:EG527250.1,INSD:T22113.1,
INSD:BP861163.1,INSD:EH944804.1,INSD:EG514745.1,
INSD:AV804405.1,INSD:BP662695.1,INSD:DR313923.1,
INSD:EG513305.1,INSD:EL016574.1,INSD:BP577740.1,
INSD:EH884737.1,INSD:BP849565.1,INSD:EH979248.1,
INSD:EG513306.1,INSD:AV822728.1,INSD:T14210.1,
INSD:EG525769.1,INSD:AV558332.1,INSD:BP566152.1,
INSD:EL068018.1,INSD:AV545253.1,INSD:BP783289.1,
INSD:EG511012.1,INSD:EL129773.1,INSD:EL052688.1,
INSD:BP848586.1,INSD:EL185560.1,INSD:BE525870.1,
INSD:DR370131.1,INSD:AV783551.1,INSD:EL243278.1,
INSD:BP633759.1,INSD:BP855851.1,INSD:AV553962.1,
INSD:EL078006.1"
/inference="similar to RNA sequence,
mRNA:INSD:BX821922.1,INSD:AY084587.1,INSD:AY096525.1,
INSD:BX820058.1,INSD:AY065273.1,INSD:BX818934.1,
INSD:BX819369.1,INSD:AY065085.1"
/note="Glycosyl hydrolase superfamily protein; FUNCTIONS
IN: cation binding, hydrolase activity, hydrolyzing
O-glycosyl compounds, catalytic activity; INVOLVED IN:
carbohydrate metabolic process; LOCATED IN: anchored to
plasma membrane, nucleus, cytoplasm; EXPRESSED IN: 23
plant structures; EXPRESSED DURING: 13 growth stages;
CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, catalytic
core (InterPro:IPR017853), Glycoside hydrolase, family 17
(InterPro:IPR000490), Glycoside hydrolase, subgroup,
catalytic core (InterPro:IPR013781); BEST Arabidopsis
thaliana protein match is: Glycosyl hydrolase superfamily
protein (TAIR:AT1G32860.1); Has 2143 Blast hits to 2127
proteins in 131 species: Archae - 0; Bacteria - 0; Metazoa
- 4; Fungi - 12; Plants - 2120; Viruses - 0; Other
Eukaryotes - 7 (source: NCBI BLink)."
/db_xref="Araport:AT2G27500"
/db_xref="TAIR:AT2G27500"
intron_pos 22:1 (1/2)
intron_pos 366:0 (2/2)
BEGIN
1 MATHSLSFFF RVLLLLFLTL SERIKGQGVG INYGQIANNL PSPARVAVLL RSLNITRVKL
61 YDADPNVLFS FSNSQVDFMI GLGNEYLQNM STDPTKAQDW LQQRLEPHIS KTRITSIVVG
121 NEIFKTNDHV LIQSLLPAMK SVYAALTNLG LEKQVTVTSA HSLDILSTSY PPSSGSFKEE
181 FIQYLQPLLD FHSQIESPFL INAYPFFAYK DSPKEVPLEY VLFQPNQGMV DPNTNLHYDN
241 MLFAQVDALY SAIKTLGHTD IEVRISETGW PSKGDENEIG ASPENAALYN GNLLKLIQQR
301 KGTPAKQSVP IDVYVFALFN ENLKPGPVSE RNYGLFYPDG KPVYNVGMQG YLPDIIYTSR
361 ATTIKILNLW RVVMGLAVAW FILDMGDKMR MR
//