LOCUS AEC08000.1 275 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana nuclear factor Y, subunit B11 protein.
ACCESSION CP002685-3579
PROTEIN_ID AEC08000.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 19698289)
AUTHORS Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D.,
Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V.,
Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L.,
Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam,L.,
Tallon,L.J., Gill,J.E., Adams,M.D., Carrera,A.J., Creasy,T.H.,
Goodman,H.M., Somerville,C.R., Copenhaver,G.P., Preuss,D.,
Nierman,W.C., White,O., Eisen,J.A., Salzberg,S.L., Fraser,C.M. and
Venter,J.C.
TITLE Sequence and analysis of chromosome 2 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 761-768 (1999)
PUBMED 10617197
REFERENCE 2 (bases 1 to 19698289)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 19698289)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="2"
/ecotype="Columbia"
protein /gene="NF-YB11"
/locus_tag="AT2G27470"
/gene_synonym="''nuclear factor Y"
/gene_synonym="F10A12.15"
/gene_synonym="F10A12_15"
/gene_synonym="nuclear factor Y"
/gene_synonym="subunit B11"
/gene_synonym="subunit B11''"
/inference="Similar to RNA sequence,
EST:INSD:ES168879.1,INSD:AU236598.1,INSD:EH974229.1,
INSD:ES158480.1,INSD:EG514074.1,INSD:ES104553.1,
INSD:EL985595.1,INSD:BP662407.1,INSD:AV794422.1,
INSD:EG503895.1,INSD:ES086324.1,INSD:BP666041.1,
INSD:EL977201.1,INSD:ES018785.1,INSD:EG525741.1,
INSD:ES057188.1,INSD:EG503894.1,INSD:BP666238.1,
INSD:EL244148.1,INSD:ES210252.1,INSD:EG484897.1,
INSD:EG522371.1,INSD:AV792057.1,INSD:BP594481.1,
INSD:ES026407.1,INSD:AU227552.1,INSD:EL981099.1,
INSD:EG525740.1,INSD:EG522372.1,INSD:BP779566.1,
INSD:ES067325.1,INSD:EL156680.1,INSD:ES120309.1,
INSD:EH919952.1,INSD:ES180430.1,INSD:BP864859.1,
INSD:EH866001.1"
/inference="similar to RNA sequence, mRNA:INSD:BT004083.1"
/note="''nuclear factor Y, subunit B11'' (NF-YB11);
FUNCTIONS IN: sequence-specific DNA binding transcription
factor activity; INVOLVED IN: regulation of transcription;
LOCATED IN: intracellular; EXPRESSED IN: 21 plant
structures; EXPRESSED DURING: 13 growth stages; CONTAINS
InterPro DOMAIN/s: Transcription factor CBF/NF-Y/archaeal
histone (InterPro:IPR003958), Histone-fold
(InterPro:IPR009072); BEST Arabidopsis thaliana protein
match is: nuclear factor Y, subunit B1 (TAIR:AT2G38880.7);
Has 148542 Blast hits to 60498 proteins in 2540 species:
Archae - 708; Bacteria - 15552; Metazoa - 38569; Fungi -
16830; Plants - 7103; Viruses - 1761; Other Eukaryotes -
68019 (source: NCBI BLink)."
/db_xref="Araport:AT2G27470"
/db_xref="TAIR:AT2G27470"
intron_pos 57:2 (1/2)
intron_pos 97:1 (2/2)
BEGIN
1 MESEKVVVDE LPLAIVRRVV KKKLSECSPD YDVSIHKEAL LAFSESARIF IHYLSATAND
61 FCKDARRQTM KADDVFKALE EMDFSEFLEP LKSSLEDFKK KNAGKKAGAA AASYPAGGAA
121 LKSSSGTASK PKETKKRKQE EPSTQKGARK SKIDEETKRN DEETENDNTE EENGNDEEDE
181 NGNDEEDEND DENTEENGND EENDDENTEE NGNDEENEKE DEENSMEENG NESEESGNED
241 HSMEENGSGV GEDNENEDGS VSGSGEEVES DEEDE
//