LOCUS AEC07999.1 745 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana sec23/sec24 transport family protein protein.
ACCESSION CP002685-3578
PROTEIN_ID AEC07999.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 19698289)
AUTHORS Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D.,
Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V.,
Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L.,
Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam,L.,
Tallon,L.J., Gill,J.E., Adams,M.D., Carrera,A.J., Creasy,T.H.,
Goodman,H.M., Somerville,C.R., Copenhaver,G.P., Preuss,D.,
Nierman,W.C., White,O., Eisen,J.A., Salzberg,S.L., Fraser,C.M. and
Venter,J.C.
TITLE Sequence and analysis of chromosome 2 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 761-768 (1999)
PUBMED 10617197
REFERENCE 2 (bases 1 to 19698289)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 19698289)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="2"
/ecotype="Columbia"
protein /locus_tag="AT2G27460"
/gene_synonym="F10A12.14"
/gene_synonym="F10A12_14"
/inference="Similar to RNA sequence,
EST:INSD:ES066561.1,INSD:EL286146.1,INSD:BP800909.1,
INSD:EL072664.1,INSD:AV792057.1,INSD:EH956326.1,
INSD:AV794422.1,INSD:BP594481.1,INSD:AU227552.1,
INSD:ES183895.1,INSD:EH990091.1,INSD:EL226969.1,
INSD:DR362681.1,INSD:BP779566.1,INSD:AV825707.1,
INSD:ES006413.1"
/inference="similar to RNA sequence,
mRNA:INSD:AY054495.1,INSD:BT010339.1"
/note="sec23/sec24 transport family protein; FUNCTIONS IN:
transporter activity, zinc ion binding; INVOLVED IN:
intracellular protein transport, vesicle-mediated
transport, ER to Golgi vesicle-mediated transport; LOCATED
IN: COPII vesicle coat; EXPRESSED IN: 22 plant structures;
EXPRESSED DURING: 13 growth stages; CONTAINS InterPro
DOMAIN/s: Sec23/Sec24, helical domain
(InterPro:IPR006900), Sec23/Sec24 beta-sandwich
(InterPro:IPR012990), Sec23/Sec24, trunk domain
(InterPro:IPR006896), Zinc finger, Sec23/Sec24-type
(InterPro:IPR006895), von Willebrand factor, type A
(InterPro:IPR002035); BEST Arabidopsis thaliana protein
match is: Sec23/Sec24 protein transport family protein
(TAIR:AT3G07100.1); Has 1620 Blast hits to 1606 proteins
in 237 species: Archae - 0; Bacteria - 2; Metazoa - 540;
Fungi - 539; Plants - 300; Viruses - 0; Other Eukaryotes -
239 (source: NCBI BLink)."
/db_xref="Araport:AT2G27460"
/db_xref="TAIR:AT2G27460"
intron_pos 110:1 (1/13)
intron_pos 132:1 (2/13)
intron_pos 150:1 (3/13)
intron_pos 208:0 (4/13)
intron_pos 270:1 (5/13)
intron_pos 319:0 (6/13)
intron_pos 370:2 (7/13)
intron_pos 398:0 (8/13)
intron_pos 436:2 (9/13)
intron_pos 469:2 (10/13)
intron_pos 511:0 (11/13)
intron_pos 604:2 (12/13)
intron_pos 676:1 (13/13)
BEGIN
1 MAVRATVSRF PIDSDAQEAS GLPWGLTVTP FAAKDENGIG PACGSNGHLL PRCENCYAYF
61 NTYCELDQWA WNCSLCGTLN GLPSDAIARY SNPHSIPEMT SSFIDLEMPL DGSEEEMTQA
121 RPVYVAAIDI SSSEEFLELT KSALLAALEA LSPGALFGLV TFSHKIGLYD VQGPIPVVKN
181 VFIPPDGESS LSLELEDVMP LLQFLAPVET CKDRIAAALE TLRPITSWER SAGAGQGMDS
241 VLMGGRGFGT AMEALFNYLG SEFGNTFALA RVFAFLSGPP DYGRGQLDTS RYGEQYASKR
301 VDADRALLPE QTPFYKDLAT IAVQSGVCVD LFAVTNEYTD LASLKFLSIE SGGSLFLYSS
361 TDDSTLPQDM FRMLNRPYAF NCVLRLRTST EFKPGNSFGH FFPDPQYENL QHIICCDSYA
421 TYAYDFEFAD NTGFSRHSGE QPVVQIAFQY TVVVPPEGLS NSEMSSSSRG KHTLQRRLRI
481 RTMQFGTAHN INEIYDSVDH EVVLSLLVHK VILASLEDGV REGRALLHDW LVILTAQYND
541 AFNLVQYKNG NKSMSSQIDI TFSQCPQLEP LPRLVFALLR NPLLRFHEEG VHPDYRIYLQ
601 CLFSVLDPSS LHCGIYPALM SYSTPDTLAY PRHSLSRAAL ITSGSPIFFL DAYTTLIVFY
661 SSTADPSIPF PPPQDCLLRQ TINKVKQERS ITPKLVFIRG GRDDATVFEN YLIEEQDVDG
721 NGFASAMGFV SFLDDISQRV TEYMK
//