LOCUS AEC07973.1 323 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana NEP-interacting protein, putative
(DUF239) protein.
ACCESSION CP002685-3549
PROTEIN_ID AEC07973.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 19698289)
AUTHORS Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D.,
Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V.,
Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L.,
Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam,L.,
Tallon,L.J., Gill,J.E., Adams,M.D., Carrera,A.J., Creasy,T.H.,
Goodman,H.M., Somerville,C.R., Copenhaver,G.P., Preuss,D.,
Nierman,W.C., White,O., Eisen,J.A., Salzberg,S.L., Fraser,C.M. and
Venter,J.C.
TITLE Sequence and analysis of chromosome 2 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 761-768 (1999)
PUBMED 10617197
REFERENCE 2 (bases 1 to 19698289)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 19698289)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="2"
/ecotype="Columbia"
protein /locus_tag="AT2G27320"
/gene_synonym="F12K2.10"
/gene_synonym="F12K2_10"
/inference="Similar to RNA sequence,
EST:INSD:EG470043.1,INSD:EG470108.1,INSD:EG470111.1,
INSD:EG427169.1,INSD:EG470119.1,INSD:EG470112.1,
INSD:EG470042.1,INSD:EG427161.1,INSD:EG470118.1,
INSD:EG427168.1,INSD:EG470114.1,INSD:EG427167.1,
INSD:EG427166.1,INSD:EG470113.1,INSD:EG470023.1,
INSD:EG427171.1,INSD:EG470110.1,INSD:EG470116.1"
/inference="similar to RNA sequence,
mRNA:INSD:AY735587.1,INSD:AY924750.1"
/note="Protein of Unknown Function (DUF239); INVOLVED IN:
biological_process unknown; LOCATED IN: endomembrane
system; EXPRESSED IN: 19 plant structures; EXPRESSED
DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s:
Protein of unknown function DUF239, plant
(InterPro:IPR004314); BEST Arabidopsis thaliana protein
match is: Protein of Unknown Function (DUF239)
(TAIR:AT2G38255.1); Has 682 Blast hits to 653 proteins in
27 species: Archae - 0; Bacteria - 11; Metazoa - 0; Fungi
- 10; Plants - 661; Viruses - 0; Other Eukaryotes - 0
(source: NCBI BLink)."
/db_xref="Araport:AT2G27320"
/db_xref="TAIR:AT2G27320"
intron_pos 25:0 (1/6)
intron_pos 53:0 (2/6)
intron_pos 103:0 (3/6)
intron_pos 158:0 (4/6)
intron_pos 176:0 (5/6)
intron_pos 226:0 (6/6)
BEGIN
1 MSLHLVLCLF SYLLLTQVAE GNIDSILKDF DCVDIYKQPA FQHPLLKHHK IQEKFSSNEK
61 LKRKDEYQPN EKYCPKGTVP ILRQRNGTES FHPDTVEYPG QHFAVLENML DGSIYRGADA
121 LISLHNLTLL NNQYSKDQIW LENGPRDQLN SIQFGLAVHP RLYGDSLTRF TIYWTGDGYK
181 RTGCYNTKCP GFVIVSRVPL IGTIFADTSV YGGNETVYTN PKVFQDGFSG NWILRIFDRV
241 VGYWPKELFT HLNKGASLVR FGGNTFPSPD GFSPPMGNGY FPSHDFYKSS HFSKVKVKNS
301 NYETIDFEKQ RTRRYADSYQ FID
//