LOCUS AEC07968.1 323 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana nuclear speckle splicing regulatory-
like protein (DUF2040) protein.
ACCESSION CP002685-3543
PROTEIN_ID AEC07968.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 19698289)
AUTHORS Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D.,
Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V.,
Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L.,
Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam,L.,
Tallon,L.J., Gill,J.E., Adams,M.D., Carrera,A.J., Creasy,T.H.,
Goodman,H.M., Somerville,C.R., Copenhaver,G.P., Preuss,D.,
Nierman,W.C., White,O., Eisen,J.A., Salzberg,S.L., Fraser,C.M. and
Venter,J.C.
TITLE Sequence and analysis of chromosome 2 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 761-768 (1999)
PUBMED 10617197
REFERENCE 2 (bases 1 to 19698289)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 19698289)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="2"
/ecotype="Columbia"
protein /locus_tag="AT2G27285"
/inference="Similar to RNA sequence,
EST:INSD:EL173926.1,INSD:EL989607.1,INSD:DR372544.1,
INSD:AW004126.1,INSD:N96610.1,INSD:BP671968.1,
INSD:EL322515.1,INSD:EG481207.1,INSD:DR231425.1,
INSD:DR231434.1,INSD:ES216292.1,INSD:AU239633.1,
INSD:DR231435.1,INSD:T45493.1,INSD:DR231429.1,
INSD:EL168431.1,INSD:DR231430.1,INSD:BP863394.1,
INSD:EL984069.1,INSD:AA650961.1,INSD:ES187899.1,
INSD:ES015719.1,INSD:DR231427.1,INSD:CB261371.1,
INSD:BP796135.1,INSD:DR231424.1,INSD:DR231426.1,
INSD:EH881459.1,INSD:AV557156.1,INSD:DR231423.1,
INSD:DR231432.1,INSD:AI995264.1,INSD:EG481209.1,
INSD:R30394.1,INSD:DR231428.1,INSD:AU230967.1,
INSD:DR231433.1,INSD:DR231431.1,INSD:AA395519.1,
INSD:ES203908.1,INSD:CA781522.1"
/inference="similar to RNA sequence,
mRNA:INSD:AK175231.1,INSD:BX819574.1,INSD:AY085624.1,
INSD:BT005450.1,INSD:AK118763.1,INSD:AK175237.1"
/note="Coiled-coil domain-containing protein 55 (DUF2040);
EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15
growth stages; CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF2040, coiled-coil
(InterPro:IPR018612); BEST Arabidopsis thaliana protein
match is: Coiled-coil domain-containing protein 55
(DUF2040) (TAIR:AT2G27280.1); Has 40028 Blast hits to
25465 proteins in 1773 species: Archae - 338; Bacteria -
5536; Metazoa - 16890; Fungi - 2992; Plants - 1451;
Viruses - 173; Other Eukaryotes - 12648 (source: NCBI
BLink)."
/db_xref="Araport:AT2G27285"
/db_xref="TAIR:AT2G27285"
intron_pos 54:0 (1/3)
intron_pos 95:0 (2/3)
intron_pos 168:0 (3/3)
BEGIN
1 MKKYGLQIRA PSQKKQSSSR PPLRPASIFD EEEDHDVEKE ISRQATKTKA HKEIEEQHKK
61 ALEEDPSAFS YDEVYDDMKQ KAVLPRMQDR EERKPRYIQN LMKQAERREK EHEIVYERKL
121 AKEREKDEHL FSDKEKFVTG AYKRKLEEQK KWLAEERLRE LREERDDVTK KKDLSDFYFN
181 IGKNVAFGAR EVEAKEAEKL EEQRKAEKLE EQRKAEKLEE LRKEVTRVEK KRKSPEKEVS
241 PDSGEFGSSR SKSLEPLEAE QAVSEKEMGS DGTEERKSSI KEAAKEVPKA INDQKRREDA
301 IAAAKERFLA RKKAKIEEYV QLG
//