LOCUS AEC07960.1 650 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana transcription factor-like protein protein.
ACCESSION CP002685-3534
PROTEIN_ID AEC07960.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 19698289)
AUTHORS Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D.,
Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V.,
Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L.,
Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam,L.,
Tallon,L.J., Gill,J.E., Adams,M.D., Carrera,A.J., Creasy,T.H.,
Goodman,H.M., Somerville,C.R., Copenhaver,G.P., Preuss,D.,
Nierman,W.C., White,O., Eisen,J.A., Salzberg,S.L., Fraser,C.M. and
Venter,J.C.
TITLE Sequence and analysis of chromosome 2 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 761-768 (1999)
PUBMED 10617197
REFERENCE 2 (bases 1 to 19698289)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 19698289)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="2"
/ecotype="Columbia"
protein /gene="LHW"
/locus_tag="AT2G27230"
/gene_synonym="F12K2.19"
/gene_synonym="F12K2_19"
/gene_synonym="LONESOME HIGHWAY"
/inference="Similar to RNA sequence,
EST:INSD:ES126925.1,INSD:ES089051.1,INSD:ES090242.1,
INSD:AV782211.1,INSD:EL978322.1,INSD:AA598124.1,
INSD:AV811387.1,INSD:DR355768.1,INSD:ES187039.1,
INSD:BP581114.1,INSD:EL138076.1,INSD:ES200962.1,
INSD:ES215505.1,INSD:ES079180.1,INSD:AV809129.1,
INSD:BP605313.1,INSD:ES115642.1,INSD:EL997086.1,
INSD:ES189861.1,INSD:EH821114.1,INSD:BP799284.1,
INSD:BP656813.1,INSD:BP601355.1,INSD:BP569142.1,
INSD:AV810225.1,INSD:BP577399.1,INSD:BP801664.1,
INSD:BP575205.1,INSD:BP797021.1,INSD:AI994281.1,
INSD:BP602329.1,INSD:BP566755.1,INSD:BP576533.1,
INSD:BP849045.1,INSD:BP864920.1,INSD:ES136462.1,
INSD:BP793002.1,INSD:EL197675.1,INSD:ES005128.1,
INSD:EL139497.1,INSD:BP609811.1,INSD:BP801520.1,
INSD:AV816505.1,INSD:BP799145.1,INSD:BP814611.1,
INSD:BP572487.1,INSD:ES034187.1,INSD:BP783127.1,
INSD:BP575915.1,INSD:ES054326.1,INSD:EG507500.1,
INSD:BP569808.1,INSD:EH806638.1,INSD:H76202.1,
INSD:BP600303.1,INSD:BP620213.1,INSD:EL977306.1,
INSD:BP569230.1,INSD:ES078586.1,INSD:AY063023.1,
INSD:H76617.1,INSD:BP574183.1,INSD:R30171.1,
INSD:EH892399.1,INSD:BP653088.1,INSD:BP604237.1,
INSD:BP584117.1,INSD:EH922451.1,INSD:EG507499.1,
INSD:BP778626.1,INSD:AV547884.1,INSD:ES152140.1,
INSD:EL999304.1,INSD:ES100881.1,INSD:ES130636.1,
INSD:EG507497.1,INSD:AV806896.1,INSD:T88245.1,
INSD:BP840038.1,INSD:ES030219.1,INSD:BP576472.1"
/inference="similar to RNA sequence,
mRNA:INSD:AJ576043.1,INSD:AK229779.1"
/note="LONESOME HIGHWAY (LHW); CONTAINS InterPro DOMAIN/s:
Helix-loop-helix DNA-binding domain (InterPro:IPR001092);
BEST Arabidopsis thaliana protein match is:
Serine/threonine-protein kinase WNK (With No
Lysine)-related (TAIR:AT1G64625.3); Has 35333 Blast hits
to 34131 proteins in 2444 species: Archae - 798; Bacteria
- 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses
- 0; Other Eukaryotes - 9610 (source: NCBI BLink)."
/db_xref="Araport:AT2G27230"
/db_xref="TAIR:AT2G27230"
intron_pos 32:2 (1/7)
intron_pos 126:0 (2/7)
intron_pos 146:0 (3/7)
intron_pos 488:0 (4/7)
intron_pos 522:0 (5/7)
intron_pos 560:0 (6/7)
intron_pos 602:0 (7/7)
BEGIN
1 MGVLLREALR SMCVNNQWSY AVFWKIGCQN SSLLIWEECY NETESSSNPR RLCGLGVDTQ
61 GNEKVQLLTN RMMLNNRIIL VGEGLVGRAA FTGHHQWILA NSFNRDVHPP EVINEMLLQF
121 SAGIQTVAVF PVVPHGVVQL GSSLPIMENL GFVNDVKGLI LQLGCVPGAL LSENYRTYEP
181 AADFIGVPVS RIIPSQGHKI LQSSAFVAET SKQHFNSTGS SDHQMVEESP CNLVDEHEGG
241 WQSTTGFLTA GEVAVPSNPD AWLNQNFSCM SNVDAAEQQQ IPCEDISSKR SLGSDDLFDM
301 LGLDDKNKGC DNSWGVSQMR TEVLTRELSD FRIIQEMDPE FGSSGYELSG TDHLLDAVVS
361 GACSSTKQIS DETSESCKTT LTKVSNSSVT TPSHSSPQGS QLFEKKHGQP LGPSSVYGSQ
421 ISSWVEQAHS LKREGSPRMV NKNETAKPAN NRKRLKPGEN PRPRPKDRQM IQDRVKELRE
481 IIPNGAKCSI DALLERTIKH MLFLQNVSKH SDKLKQTGES KIMKEDGGGA TWAFEVGSKS
541 MVCPIVVEDI NPPRIFQVEM LCEQRGFFLE IADWIRSLGL TILKGVIETR VDKIWARFTV
601 EASRDVTRME IFMQLVNILE QTMKCGGNSK TILDGIKATM PLPVTGGCSM
//