LOCUS AEC07948.1 1204 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana Structural maintenance of chromosomes
(SMC) family protein protein.
ACCESSION CP002685-3520
PROTEIN_ID AEC07948.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 19698289)
AUTHORS Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D.,
Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V.,
Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L.,
Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam,L.,
Tallon,L.J., Gill,J.E., Adams,M.D., Carrera,A.J., Creasy,T.H.,
Goodman,H.M., Somerville,C.R., Copenhaver,G.P., Preuss,D.,
Nierman,W.C., White,O., Eisen,J.A., Salzberg,S.L., Fraser,C.M. and
Venter,J.C.
TITLE Sequence and analysis of chromosome 2 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 761-768 (1999)
PUBMED 10617197
REFERENCE 2 (bases 1 to 19698289)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 19698289)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="2"
/ecotype="Columbia"
protein /gene="TTN7"
/locus_tag="AT2G27170"
/gene_synonym="SMC3"
/gene_synonym="STRUCTURAL MAINTENANCE OF CHROMOSOMES 3"
/gene_synonym="T22O13.6"
/gene_synonym="TITAN7"
/inference="Similar to RNA sequence,
EST:INSD:BP820820.1,INSD:AV567365.1,INSD:ES056891.1,
INSD:ES050086.1,INSD:EG461267.1,INSD:ES201450.1,
INSD:EG445376.1,INSD:EL008599.1,INSD:CK118980.1,
INSD:CA781622.1,INSD:BP791375.1,INSD:ES117406.1,
INSD:ES056968.1,INSD:ES134654.1,INSD:ES115220.1,
INSD:ES026493.1,INSD:ES122543.1,INSD:ES160669.1,
INSD:EL289168.1,INSD:ES010596.1,INSD:ES126088.1,
INSD:DR200924.1,INSD:EL210385.1,INSD:ES050337.1,
INSD:DR200923.1,INSD:ES025527.1,INSD:EH940872.1,
INSD:DR200928.1,INSD:AV789348.1,INSD:ES120884.1,
INSD:ES003882.1,INSD:EL151170.1,INSD:DR200927.1,
INSD:ES148446.1,INSD:EG427996.1,INSD:ES010866.1,
INSD:DR200926.1,INSD:AU229443.1,INSD:ES065994.1,
INSD:DR376346.1,INSD:ES195609.1,INSD:DR200925.1,
INSD:AV825017.1,INSD:ES089186.1,INSD:BP808945.1"
/inference="similar to RNA sequence,
mRNA:INSD:AY074544.1,INSD:AK220965.1"
/note="TITAN7 (TTN7); FUNCTIONS IN: ATP binding; INVOLVED
IN: sister chromatid cohesion, chromosome segregation;
LOCATED IN: cohesin complex, nucleus; EXPRESSED IN: 22
plant structures; EXPRESSED DURING: 13 growth stages;
CONTAINS InterPro DOMAIN/s: SMCs flexible hinge
(InterPro:IPR010935), RecF/RecN/SMC protein, N-terminal
(InterPro:IPR003395); BEST Arabidopsis thaliana protein
match is: structural maintenance of chromosomes 2
(TAIR:AT5G62410.1); Has 158776 Blast hits to 77347
proteins in 3496 species: Archae - 2059; Bacteria - 28403;
Metazoa - 67946; Fungi - 11949; Plants - 6773; Viruses -
706; Other Eukaryotes - 40940 (source: NCBI BLink)."
/db_xref="Araport:AT2G27170"
/db_xref="TAIR:AT2G27170"
intron_pos 6:0 (1/26)
intron_pos 31:1 (2/26)
intron_pos 44:1 (3/26)
intron_pos 67:0 (4/26)
intron_pos 91:0 (5/26)
intron_pos 117:2 (6/26)
intron_pos 144:0 (7/26)
intron_pos 183:1 (8/26)
intron_pos 242:0 (9/26)
intron_pos 324:0 (10/26)
intron_pos 364:2 (11/26)
intron_pos 413:0 (12/26)
intron_pos 470:2 (13/26)
intron_pos 504:0 (14/26)
intron_pos 549:2 (15/26)
intron_pos 617:0 (16/26)
intron_pos 646:1 (17/26)
intron_pos 696:1 (18/26)
intron_pos 747:0 (19/26)
intron_pos 811:0 (20/26)
intron_pos 872:1 (21/26)
intron_pos 896:0 (22/26)
intron_pos 946:2 (23/26)
intron_pos 1003:0 (24/26)
intron_pos 1052:0 (25/26)
intron_pos 1085:0 (26/26)
BEGIN
1 MFIKQVIIEG FKSYKEQVAT EEFSNKVNCV VGANGSGKSN FFHAIRFVLS DIYQNLRSED
61 RHALLHEGAG HQVVSAFVEI VFDNSDNRFP VDKEEIRLRR TVGLKKDDYF LDGKHITKGE
121 VMNLLESAGF SRANPYYVVQ QGKIASLTLM KDIERLDLLK EIGGTRVYEE RRRESLRIMQ
181 ETGNKRKQII EVVHYLDERL RELDEEKEEL RKYQQLDKQR KSLEYTIYDK ELHDAREKLE
241 QVEVARTKAS EESTKMYDRV EKAQDDSKSL DESLKELTKE LQTLYKEKET VEAQQTKALK
301 KKTKLELDVK DFQDRITGNI QSKNDALEQL NTVEREMQDS LRELEAIKPL YESQVDKENQ
361 TSKRINELEK TLSILYQKQG RATQFSNKAA RDKWLRKEIE DLKRVLDSNT VQEQKLQDEI
421 LRLNTDLTER DEHIKKHEVE IGELESRISK SHELFNTKKR ERDEEQRKRK EKWGEESQLS
481 SEIDKLKTEL ERAKKNLDHA TPGDVRRGLN SIRRICADYR INGVFGPLVE LVDCDEKFFT
541 AVEVTAGNSL FNVVVENDDI STKIIRHLNS LKGGRVTFLP LNRIKAPRVN YPKDSDAIPL
601 LKKLKFDSKF EPALGQVFGR TVVCRDLNVA TRVAKNDDLD CITMEGDQVS RKGGMTGGFY
661 DHRRSKLRFM NIIMQNTKSI NEKEKELEDV RRQLQVIDQQ ITQLVTEQQR LEADWTLCKL
721 QVEQLKQEIA NANKQKHAIH KAIEYKEKLL GDIRTRIDQV RSSMSMKEAE MGTELVDHLT
781 PEEREQLSKL NPEIKDLKEK KFAYQADRIE RETRKAELEA NIATNLKRRI TELQATIASI
841 DDDSLPSSAG TKEQELDDAK LSVNEAAKEL KSVCDSIDEK TKQIKKIKDE KAKLKTLEDD
901 CKGTLQDLDK KLEELFSLRN TLLAKQDEYT KKIRGLGPLS SDAFDTYKRK NIKELQKMLH
961 RCSEQLQQFS HVNKKALDQY VNFTEQREEL QNRQAELDAG DEKIKELITV LDQRKDESIE
1021 RTFKGVAHHF RDVFSELVQD GYGNLIIMKK KDLDNDDEDD DDDDGGREAV TEGRVEKYIG
1081 VKVKVSFTGQ GETQLMKQLS GGQKTVVALA LIFAIQRCDP APFYLFDEID AALDPQYRTA
1141 VGNLIRRLAD DYGTQFITTT FRPELVRVAD KIYGVFHKNR VSIVNVISKD QALDFIEKDQ
1201 SHDT
//