LOCUS AEC07913.1 218 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana Polynucleotidyl transferase, ribonuclease
H-like superfamily protein protein.
ACCESSION CP002685-3475
PROTEIN_ID AEC07913.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 19698289)
AUTHORS Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D.,
Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V.,
Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L.,
Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam,L.,
Tallon,L.J., Gill,J.E., Adams,M.D., Carrera,A.J., Creasy,T.H.,
Goodman,H.M., Somerville,C.R., Copenhaver,G.P., Preuss,D.,
Nierman,W.C., White,O., Eisen,J.A., Salzberg,S.L., Fraser,C.M. and
Venter,J.C.
TITLE Sequence and analysis of chromosome 2 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 761-768 (1999)
PUBMED 10617197
REFERENCE 2 (bases 1 to 19698289)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 19698289)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="2"
/ecotype="Columbia"
protein /locus_tag="AT2G26970"
/gene_synonym="T20P8.2"
/gene_synonym="T20P8_2"
/inference="Similar to RNA sequence,
EST:INSD:AV785756.1,INSD:EH843817.1,INSD:EL028523.1,
INSD:ES118207.1,INSD:EH924289.1,INSD:EL228722.1,
INSD:ES028044.1,INSD:EL043742.1,INSD:EL203633.1,
INSD:EL300816.1,INSD:ES046958.1,INSD:BP662634.1,
INSD:EH929669.1,INSD:ES161762.1,INSD:BP626981.1,
INSD:EL247282.1"
/note="Polynucleotidyl transferase, ribonuclease H-like
superfamily protein; FUNCTIONS IN: exonuclease activity,
nucleic acid binding; INVOLVED IN: biological_process
unknown; LOCATED IN: endomembrane system, intracellular;
EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13
growth stages; CONTAINS InterPro DOMAIN/s: Exonuclease
(InterPro:IPR006055), Polynucleotidyl transferase,
ribonuclease H fold (InterPro:IPR012337), Exonuclease,
RNase T/DNA polymerase III (InterPro:IPR013520); Has 35333
Blast hits to 34131 proteins in 2444 species: Archae -
798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants
- 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI
BLink)."
/db_xref="Araport:AT2G26970"
/db_xref="TAIR:AT2G26970"
intron_pos 27:1 (1/7)
intron_pos 51:1 (2/7)
intron_pos 77:0 (3/7)
intron_pos 104:1 (4/7)
intron_pos 123:0 (5/7)
intron_pos 152:0 (6/7)
intron_pos 182:1 (7/7)
BEGIN
1 MNKLSNAFSV LAFADEDAPM ASSSSTESVN GSLEDGDYKQ PLVWIDLEMT GLNVEVDRIL
61 EIACIITNGD LTQSVEGPDL VVRQTKDCLD KMDDWCQTHH GASGLTKKVL LSAITEREAE
121 QKVIEFVKKH VGSGNPLLAG NSVYVDFLFL KKYMPELAAL FPHILVDVSS VKALCARWFP
181 IERRKAPAKK NNHRAMDDIR ESIKELKYYK KTIFKARR
//