LOCUS AEC07912.1 222 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana Polynucleotidyl transferase, ribonuclease
H-like superfamily protein protein.
ACCESSION CP002685-3476
PROTEIN_ID AEC07912.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 19698289)
AUTHORS Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D.,
Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V.,
Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L.,
Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam,L.,
Tallon,L.J., Gill,J.E., Adams,M.D., Carrera,A.J., Creasy,T.H.,
Goodman,H.M., Somerville,C.R., Copenhaver,G.P., Preuss,D.,
Nierman,W.C., White,O., Eisen,J.A., Salzberg,S.L., Fraser,C.M. and
Venter,J.C.
TITLE Sequence and analysis of chromosome 2 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 761-768 (1999)
PUBMED 10617197
REFERENCE 2 (bases 1 to 19698289)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 19698289)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="2"
/ecotype="Columbia"
protein /locus_tag="AT2G26970"
/gene_synonym="T20P8.2"
/gene_synonym="T20P8_2"
/inference="Similar to RNA sequence,
EST:INSD:AV785756.1,INSD:EH843817.1,INSD:EL028523.1,
INSD:ES118207.1,INSD:EH924289.1,INSD:EL228722.1,
INSD:ES028044.1,INSD:EL043742.1,INSD:EL203633.1,
INSD:ES046958.1,INSD:EL300816.1,INSD:BP842224.1,
INSD:AV824341.1,INSD:BP662634.1,INSD:EH929669.1,
INSD:ES161762.1,INSD:BP626981.1,INSD:EL247282.1"
/inference="similar to RNA sequence,
mRNA:INSD:AY064031.1,INSD:BT001963.1"
/note="Polynucleotidyl transferase, ribonuclease H-like
superfamily protein; FUNCTIONS IN: exonuclease activity,
nucleic acid binding; INVOLVED IN: biological_process
unknown; LOCATED IN: endomembrane system, intracellular;
EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13
growth stages; CONTAINS InterPro DOMAIN/s: Exonuclease
(InterPro:IPR006055), Polynucleotidyl transferase,
ribonuclease H fold (InterPro:IPR012337), Exonuclease,
RNase T/DNA polymerase III (InterPro:IPR013520); Has 3054
Blast hits to 3053 proteins in 1168 species: Archae - 2;
Bacteria - 2035; Metazoa - 128; Fungi - 125; Plants - 51;
Viruses - 6; Other Eukaryotes - 707 (source: NCBI BLink)."
/db_xref="Araport:AT2G26970"
/db_xref="TAIR:AT2G26970"
intron_pos 27:1 (1/7)
intron_pos 55:1 (2/7)
intron_pos 81:0 (3/7)
intron_pos 108:1 (4/7)
intron_pos 127:0 (5/7)
intron_pos 156:0 (6/7)
intron_pos 186:1 (7/7)
BEGIN
1 MNKLSNAFSV LAFADEDAPM ASSSSTGKQE ESVNGSLEDG DYKQPLVWID LEMTGLNVEV
61 DRILEIACII TNGDLTQSVE GPDLVVRQTK DCLDKMDDWC QTHHGASGLT KKVLLSAITE
121 REAEQKVIEF VKKHVGSGNP LLAGNSVYVD FLFLKKYMPE LAALFPHILV DVSSVKALCA
181 RWFPIERRKA PAKKNNHRAM DDIRESIKEL KYYKKTIFKA RR
//