LOCUS AEC07900.2 405 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana FBD, F-box and Leucine Rich Repeat
domains containing protein protein.
ACCESSION CP002685-3462
PROTEIN_ID AEC07900.2
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 19698289)
AUTHORS Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D.,
Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V.,
Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L.,
Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam,L.,
Tallon,L.J., Gill,J.E., Adams,M.D., Carrera,A.J., Creasy,T.H.,
Goodman,H.M., Somerville,C.R., Copenhaver,G.P., Preuss,D.,
Nierman,W.C., White,O., Eisen,J.A., Salzberg,S.L., Fraser,C.M. and
Venter,J.C.
TITLE Sequence and analysis of chromosome 2 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 761-768 (1999)
PUBMED 10617197
REFERENCE 2 (bases 1 to 19698289)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 19698289)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="2"
/ecotype="Columbia"
protein /locus_tag="AT2G26860"
/gene_synonym="F12C20.10"
/gene_synonym="F12C20_10"
/inference="Similar to RNA sequence,
EST:INSD:EG435172.1,INSD:EG435194.1,INSD:EG435159.1,
INSD:EG435192.1,INSD:ES001943.1,INSD:EG435157.1,
INSD:EG435071.1,INSD:EL035125.1,INSD:DR356469.1,
INSD:EG435171.1,INSD:EG435057.1,INSD:EG435055.1,
INSD:ES038047.1,INSD:ES108254.1,INSD:EG435162.1,
INSD:EG435160.1,INSD:EG435197.1,INSD:EG435069.1,
INSD:EG435165.1,INSD:ES011261.1,INSD:EG435167.1,
INSD:EG435188.1,INSD:EG435155.1,INSD:EG435553.1,
INSD:EG435183.1,INSD:EG435173.1,INSD:EG435190.1,
INSD:EG435154.1"
/inference="similar to RNA sequence, mRNA:INSD:AY219106.1"
/note="FBD, F-box and Leucine Rich Repeat domains
containing protein; CONTAINS InterPro DOMAIN/s: F-box
domain, cyclin-like (InterPro:IPR001810), F-box domain,
Skp2-like (InterPro:IPR022364), Leucine-rich repeat 2
(InterPro:IPR013101); BEST Arabidopsis thaliana protein
match is: F-box/RNI-like superfamily protein
(TAIR:AT5G60610.1); Has 35333 Blast hits to 34131 proteins
in 2444 species: Archae - 798; Bacteria - 22429; Metazoa -
974; Fungi - 991; Plants - 531; Viruses - 0; Other
Eukaryotes - 9610 (source: NCBI BLink)."
/db_xref="Araport:AT2G26860"
/db_xref="TAIR:AT2G26860"
intron_pos 288:0 (1/2)
intron_pos 334:0 (2/2)
BEGIN
1 MDRISGLPDE LLVEILHCLP TKEVVSTSIL SKRWEFLWLW VPKLTFVMNH YESDLPIQDF
61 ITKNLRLLKP QVIESFHLQC FSSSFKPEDI KHWVVTTISR RVRELIINYC DLSWLDKPVV
121 LLDLPNSLYT CTSLVTLKLI GHSIIVDVPR TVSLPCLKTL ELDSVAYSNE ESLRLLLSYC
181 PVLEDLTIHR DMHDNVKTLV IIVPSLLRLN LPIDGAYSCD GYVIVTPALK YLKVPGLYRE
241 DFSYLLTHMP NVEEADLSVE QDVERLFESI TSVKRLSLFV LLDIEDESMY HNGIYFNQLE
301 HLNLHIYRDN WSKLLVRLLE DSPKLRVLKI VVDGEPSFDE EFEHVSWIYN DESSVPKCLL
361 DSLEVFEFAG YTRRPEERDF VSFILKHACH LKSSSISRLS CYVLE
//