LOCUS AEC07866.1 294 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana Glycosyl hydrolase superfamily protein
protein.
ACCESSION CP002685-3412
PROTEIN_ID AEC07866.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 19698289)
AUTHORS Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D.,
Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V.,
Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L.,
Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam,L.,
Tallon,L.J., Gill,J.E., Adams,M.D., Carrera,A.J., Creasy,T.H.,
Goodman,H.M., Somerville,C.R., Copenhaver,G.P., Preuss,D.,
Nierman,W.C., White,O., Eisen,J.A., Salzberg,S.L., Fraser,C.M. and
Venter,J.C.
TITLE Sequence and analysis of chromosome 2 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 761-768 (1999)
PUBMED 10617197
REFERENCE 2 (bases 1 to 19698289)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 19698289)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="2"
/ecotype="Columbia"
protein /locus_tag="AT2G26600"
/gene_synonym="T9J22.27"
/gene_synonym="T9J22_27"
/inference="Similar to RNA sequence,
EST:INSD:ES084294.1,INSD:AU239527.1,INSD:EL198230.1,
INSD:EL989323.1,INSD:AV532177.1,INSD:EL232791.1,
INSD:ES126583.1,INSD:AV566409.1,INSD:EL206947.1,
INSD:ES119673.1,INSD:EL012144.1,INSD:EH880597.1,
INSD:EL150948.1,INSD:AV440306.1,INSD:ES196352.1,
INSD:DR378417.1,INSD:EL056659.1,INSD:EL111949.1,
INSD:ES039961.1,INSD:EL006276.1,INSD:EL187017.1"
/inference="similar to RNA sequence,
mRNA:INSD:AK118654.1,INSD:BT005288.1"
/note="Glycosyl hydrolase superfamily protein; FUNCTIONS
IN: cation binding, hydrolase activity, hydrolyzing
O-glycosyl compounds, catalytic activity; INVOLVED IN:
carbohydrate metabolic process; LOCATED IN: anchored to
membrane; EXPRESSED IN: 22 plant structures; EXPRESSED
DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s:
Glycoside hydrolase, catalytic core (InterPro:IPR017853),
Glycoside hydrolase, family 17 (InterPro:IPR000490),
Glycoside hydrolase, subgroup, catalytic core
(InterPro:IPR013781); BEST Arabidopsis thaliana protein
match is: Glycosyl hydrolase superfamily protein
(TAIR:AT3G15800.1); Has 2078 Blast hits to 2068 proteins
in 126 species: Archae - 0; Bacteria - 0; Metazoa - 3;
Fungi - 2; Plants - 2065; Viruses - 0; Other Eukaryotes -
8 (source: NCBI BLink)."
/db_xref="Araport:AT2G26600"
/db_xref="TAIR:AT2G26600"
intron_pos 276:0 (1/1)
BEGIN
1 MSSNADHAFS WVKENIQSFL PKTRIRGIAI GNEVLGGGDS ELAGALLGAA KNVYNALKKM
61 NLEDTVQITT AHSQAVFSDS YPPSSCVFKE NVVQFMKPLL EFFQQIGSPF CLNAYPFLAY
121 TYNPKEIDIN YALFKPTEGI YDPKTDLHYD NMLDAQIDAA YMALQDAGFK KMEVMITETG
181 WASKGDSDEP AATPENARTY NYNLRKRLAK KKGTPLRPKT VLKAYIFALF NENSKPGKSS
241 ETHFGLFKPD GTISYDIGFN NLKSDSPKSL ISSSKSARYY VALVISVSAF LLMI
//