LOCUS AEC07841.1 585 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana RED family protein protein.
ACCESSION CP002685-3380
PROTEIN_ID AEC07841.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 19698289)
AUTHORS Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D.,
Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V.,
Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L.,
Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam,L.,
Tallon,L.J., Gill,J.E., Adams,M.D., Carrera,A.J., Creasy,T.H.,
Goodman,H.M., Somerville,C.R., Copenhaver,G.P., Preuss,D.,
Nierman,W.C., White,O., Eisen,J.A., Salzberg,S.L., Fraser,C.M. and
Venter,J.C.
TITLE Sequence and analysis of chromosome 2 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 761-768 (1999)
PUBMED 10617197
REFERENCE 2 (bases 1 to 19698289)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 19698289)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="2"
/ecotype="Columbia"
protein /gene="SMU2"
/locus_tag="AT2G26460"
/gene_synonym="SUPPRESSORS OF MEC-8 AND UNC-52 2"
/gene_synonym="T9J22.13"
/gene_synonym="T9J22_13"
/inference="Similar to RNA sequence,
EST:INSD:Z34118.1,INSD:BX835609.1,INSD:EL000429.1,
INSD:EL307787.1,INSD:EG430012.1,INSD:EL990985.1,
INSD:ES103341.1,INSD:Z34059.1,INSD:CK119995.1,
INSD:Z33847.1,INSD:ES149910.1,INSD:ES168218.1,
INSD:EL158473.1,INSD:EG449040.1,INSD:ES028089.1,
INSD:EG449039.1,INSD:EH995082.1,INSD:BX839435.1,
INSD:EH920206.1,INSD:EL982963.1,INSD:BE524086.1,
INSD:EL990269.1,INSD:ES176521.1"
/inference="similar to RNA sequence,
mRNA:INSD:BX821045.1,INSD:AY219109.1,INSD:BX821160.1,
INSD:BT012549.1,INSD:BT011249.1,INSD:BX820686.1"
/note="SUPPRESSORS OF MEC-8 AND UNC-52 2 (SMU2); FUNCTIONS
IN: molecular_function unknown; INVOLVED IN: RNA splicing;
LOCATED IN: nucleus; EXPRESSED IN: 25 plant structures;
EXPRESSED DURING: 14 growth stages; CONTAINS InterPro
DOMAIN/s: RED-like, N-terminal (InterPro:IPR012916),
RED-like, C-terminal (InterPro:IPR012492); Has 470 Blast
hits to 361 proteins in 150 species: Archae - 0; Bacteria
- 2; Metazoa - 251; Fungi - 94; Plants - 62; Viruses - 3;
Other Eukaryotes - 58 (source: NCBI BLink)."
/db_xref="Araport:AT2G26460"
/db_xref="TAIR:AT2G26460"
intron_pos 16:2 (1/10)
intron_pos 63:2 (2/10)
intron_pos 80:1 (3/10)
intron_pos 118:2 (4/10)
intron_pos 135:0 (5/10)
intron_pos 165:0 (6/10)
intron_pos 188:0 (7/10)
intron_pos 229:1 (8/10)
intron_pos 365:0 (9/10)
intron_pos 493:0 (10/10)
BEGIN
1 MKPSKSHHKE KTARRREEKL EESDNPKYRD RAKERRENQN PDYDPSELSS FHAVAPPGAV
61 DIRAADALKI SIENSKYLGG DVEHTHLVKG LDYALLNKVR SEIVKKPDGE DGDGGKTSAP
121 KEDQRVTFRT IAAKSVYQWI VKPQTIIKSN EMFLPGRMTF VYDMEGGYTH DIPTTLYRSK
181 ADCPVPEEFV TVNVDGSVLD RIAKIMSYLR LGSSGKVLKK KKKEKDGKGK MSTIANDYDE
241 DDNKSKIENG SSVNISDREV LPPPPPLPPG INHLDLSTKQ EEPPVARTDD DDIFVGEGVD
301 YTVPGKDVTQ SPISEDMEES PRDKEKVSYF DEPAYGPVQE KVPYFAEPAY GPVQPSAGQE
361 WQDMSAYGAM QTQGLAPGYP GEWQEYQYAE QTGYQEQYLQ PGMEGYEVQP ETDVLLDPQL
421 MSQEEKDRGL GSVFKRDDQR LQQLRESDAR EKDPTFVSES YSECYPGYQE YNHEIVGSDE
481 EPDLSKMDMG GKAKGGLHRW DFETEEEWEK YNEQKEAMPK AAFQFGVKMQ DGRKTRKQNR
541 DRDQKLNNEL HQINKILTRK KMEKEGGDVA SLDAAEAQTP KRSKH
//