LOCUS AEC07830.1 173 aa PRT PLN 23-MAR-2023
DEFINITION Arabidopsis thaliana MD-2-related lipid recognition domain-
containing protein protein.
ACCESSION CP002685-3362
PROTEIN_ID AEC07830.1
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (bases 1 to 19698289)
AUTHORS Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D.,
Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V.,
Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L.,
Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam,L.,
Tallon,L.J., Gill,J.E., Adams,M.D., Carrera,A.J., Creasy,T.H.,
Goodman,H.M., Somerville,C.R., Copenhaver,G.P., Preuss,D.,
Nierman,W.C., White,O., Eisen,J.A., Salzberg,S.L., Fraser,C.M. and
Venter,J.C.
TITLE Sequence and analysis of chromosome 2 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 761-768 (1999)
PUBMED 10617197
REFERENCE 2 (bases 1 to 19698289)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE 3 (bases 1 to 19698289)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
FEATURES Qualifiers
source /organism="Arabidopsis thaliana"
/mol_type="genomic DNA"
/db_xref="taxon:3702"
/chromosome="2"
/ecotype="Columbia"
protein /locus_tag="AT2G26370"
/gene_synonym="T9J22.4"
/gene_synonym="T9J22_4"
/inference="Similar to RNA sequence,
EST:INSD:BP853740.1,INSD:EG465538.1,INSD:EG443834.1,
INSD:EG443812.1,INSD:EG443811.1,INSD:EG443813.1,
INSD:EG443833.1,INSD:EG443814.1,INSD:EG465537.1,
INSD:EG443835.1,INSD:EG443815.1"
/inference="similar to RNA sequence,
mRNA:INSD:AY954801.1,INSD:BT010495.1,INSD:AK175178.1"
/note="MD-2-related lipid recognition domain-containing
protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; CONTAINS InterPro DOMAIN/s:
MD-2-related lipid-recognition (InterPro:IPR003172); BEST
Arabidopsis thaliana protein match is: MD-2-related lipid
recognition domain-containing protein (TAIR:AT5G23820.1);
Has 39 Blast hits to 39 proteins in 2 species: Archae - 0;
Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 39; Viruses
- 0; Other Eukaryotes - 0 (source: NCBI BLink)."
/db_xref="Araport:AT2G26370"
/db_xref="TAIR:AT2G26370"
intron_pos 34:1 (1/3)
intron_pos 74:1 (2/3)
intron_pos 133:0 (3/3)
BEGIN
1 MAISHAQPVL LLLSSLYFLS AFGAGAYNFE NCKNAPIDYN YGITNVTRVE ISPYPVGPYD
61 EPTITISGFT SDDSYIIYRA TIHVLYKYEN VNSTIINYDL SDVMGEDPCS IEPGEKFVLT
121 LSKVPGLQSL PHKDKSKIVI SLVDEYGDDA EVPLLKMCVE FDNPAPTTTS VSA
//